Brassica napus (rape): 106421799
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Entry
106421799 CDS
T04128
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
bna
Brassica napus (rape)
Pathway
bna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106421799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106421799
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106421799
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106421799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
106421799
NCBI-ProteinID:
XP_013718067
LinkDB
All DBs
Position
C7:20535175..20543520
Genome browser
AA seq
1188 aa
AA seq
DB search
MVIKGKDTVPNTEDFKELRNLVTHHIESFDYMTEKGLDVMFTRINAVNVYDPSTENKWKI
SLENPKVFSPQKESLSSNSRKESLYPFECRQAKISYMGALMADVCFQYDNGLGSGLGAVV
REKFEFGELPIMLMSNRCHLQGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRN
HPTGMIRNSFTGKREGYSDKAVAIRCVRDDQSAVTIKVYYNRNGSARVGFWIGGREFLLP
VGLVLKALTETNDEEIYESLNCCYNEHYGRGDGSIGTQLVRERAKIILDEVRDLGLFTRE
QCRKYLGEHFKSDIDGLEKESYPVVAEAVLKNYIFVHLDNDDDKFNLLIFIIQKLFSLVD
QTSLPDNPDSLQNQEILVPGHLITIYLKEKLEEWLRKCKSTIEEEMRNVKSKFDFENHAD
IKKLMNRNQPRSIGTSIESLLKSGCMTTRSSLDLQQKVGYTVQAERLNFLRFLSFFRAVH
RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRISSQFDSSGNIRDF
RKIRRSVVDVLVGIGMVTSLPKLVRAGPPKVIHVLLDGQVVGSLSSNLVPEVVAYLRRLK
VEAPSIIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNTSIPSNNLELIGPFEQVF
MEISCPDGGNGGRNNSSLATHEEIDPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMA
YSTQALQFRADQKIYHLQTPQSPVVRTKTYTAYNIDENPTGTNAIVAVLAHTGFDMEDAM
ILNKSSVERGMCHGQIYQTEAIDLSDQKSRSGSGNKRFRRNNAVKSAHPCVDADGLPYVG
QKIYPNETYCSIYDGVTNDFKPMKRKGTDPVIVDFVSLDMKSKNHPQKANIRFRHARNPI
IGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKG
GSLRGEFVDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKQKGFNHYGTETLYSGYLGVE
LKCEIFMGPVYYQRLRHMVSDKFQVRSTGMVDQLTRQPIKGRRRGGGIRFGEMERDSLLA
HGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVLNVQQKKLIREIGNLPPGRTPKKVTC
ASCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSNSGEGSDSEGV
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggttatcaaagggaaagacacggttcccaacaccgaagacttcaaggagcttcgcaat
ctcgtcacgcaccacatagagtctttcgattacatgacagagaaaggtctcgatgttatg
ttcactcgaatcaacgccgtcaatgtttacgacccatccaccgagaacaagtggaaaatt
agcttagaaaatccgaaagtgttctctcctcagaaggagagtttgagttcaaattcaagg
aaagagtctttgtatccctttgagtgtcggcaggcgaagatatcgtacatgggtgcgctt
atggctgatgtttgctttcagtatgacaatggtctcggaagtggccttggagccgtcgtt
agagagaagtttgagtttggtgaattacctattatgctgatgtcaaaccgttgccactta
cagggtgctgattgccgaaagcttctaaagtgtaaagagtcaacttctgaaatgggaggg
tactttattttgaatgggattgagagagtgttccgatgtgttattgcaccaaagcggaac
catccaacgggtatgatccggaactcattcactggaaaacgggaaggatacagtgacaaa
gcagttgccattaggtgtgttagagacgaccagtccgctgtcactattaaggtgtactat
aatcgcaatggaagtgccagagttggattctggatagggggaagggaatttttgcttccc
gtcggccttgttctcaaggctctcactgaaaccaacgatgaggaaatatacgaaagcctg
aactgttgttacaatgagcattacggaagaggcgatggatctattggaacccaactcgta
cgagagcgagccaaaatcattcttgatgaagtgagagacttgggtctttttacccgggaa
cagtgccgcaagtatctaggagagcattttaaatctgatattgatgggctggaaaaagaa
agctatcctgttgttgctgaagccgtgctcaagaattatatttttgttcaccttgacaac
gatgacgacaagttcaatttgctcatcttcataattcaaaagctcttttctctggtggat
cagacttctttacctgataatccggattctctgcaaaatcaagaaattttagtcccgggt
caccttataacaatttacctcaaggaaaaacttgaagagtggctgcggaaatgcaaaagt
actattgaagaggagatgcgtaatgttaagagcaaatttgactttgaaaatcatgctgat
atcaagaagcttatgaacagaaatcaacccaggagtattggcacatcaattgagtctttg
ttgaaatcaggatgtatgactacaaggtctagtttggatttacagcagaaagtaggttac
actgttcaggcagagaggttgaactttctccgtttcctttcatttttccgggcggttcat
cgaggtgcttcctttgctggacttcggacaacaactgtgaggaagctgcttcctgaatct
tggggttttctttgccctgttcacactcctgatggggagccctgtggattactgaatcat
atgacacgtacttgccgaatctcttctcaattcgattccagtggaaacatcagagacttt
cggaagataagaaggtcggtcgttgatgttcttgttgggattgggatggtaacttcattg
ccaaaacttgtacgagctggaccaccaaaagtgattcatgttcttttagatggccaagtt
gttggatctctatcttctaacttagtccctgaggttgtcgcttatttgcggagactgaaa
gtggaggctccttcaatcattcctgaagacctcgaagtcggatatgtaccaacaagcatg
ggtggatcttatcctggattgtatttggcatcatgtcccgcaagattcatcaggcctgtt
aaaaacacatcgattccatccaacaatcttgaactgattggaccatttgagcaggttttc
atggaaataagctgtcctgatggtggaaatggaggaaggaataactcatcccttgcaact
catgaggaaattgatccaactgggatgataagtgtggttgctaatcttacaccttggtct
gatcataaccaaagtccccgtaacatgtatcagtgtcagatggcgaaacaaaccatggct
tactctactcaagcactccaattccgtgctgaccagaagatttaccacttgcagactcct
caatcccctgtggtgcgcacgaaaacgtacactgcatacaacattgatgagaatccaaca
gggactaatgcaatagttgctgtcctggctcatactggatttgatatggaagatgctatg
attttgaacaaatcatctgtggagcgggggatgtgtcatgggcaaatataccagacagaa
gctattgatttgtcagatcagaaaagccgatcgggtagtggtaataaaaggtttaggagg
aataatgctgtcaaatccgctcatccttgtgttgatgctgatggattaccatatgttgga
cagaaaatatatccaaacgagacgtattgtagtatctatgatggggtaaccaacgatttt
aagcccatgaagcgaaaaggaacagaccctgtcatcgttgactttgtttctcttgacatg
aagagcaagaaccatcctcagaaggcaaacattcgatttaggcatgccaggaatcccata
atcggtgacaaattcagtagtagacacggtcaaaagggtgtttgctcgcagctttggcct
gatattgatatgccgttcaatggagtgactggaatgcgtccggatctcatcattaaccct
catgctttcccatcaagaatgacaattgctatgcttttggaatctattgctgctaaggga
ggtagtctgcgtggggagtttgtagatgcaacaccgttccgtgatgcagtaaagaaaaca
aacggagaagaagagagcaaatccagtttacttgttgatgatcttggttccatgctgaag
caaaaaggattcaatcactatgggacagagacattatacagtggttatttaggagtagag
ctcaagtgtgagatatttatggggcctgtttactaccaaaggctgcgtcacatggtctca
gacaagttccaggttagatctacaggaatggttgatcagctaactcgtcagccaatcaaa
ggaaggagacgaggtggagggattcgatttggtgaaatggaaagagactcattgcttgct
catggagcttcctatctattacacgacaggctccacacctcttcagatcatcacattgcg
gatgtgtgttccctgtgtggaagcttgctgacttcttcggttttgaacgttcaacagaag
aagctgattcgagagattggaaatttaccacctggtaggactccaaagaaggtaacttgc
gcttcttgcaagacaagcaaagggatggagactgtcgcaatgccgtacgtgttcaggtat
ttggctgcagaattggcgtcaatgaatattaagatgactcttcagttaagcaacagtggt
gaaggaagcgacagtgaaggagtctag
DBGET
integrated database retrieval system