Brassica napus (rape): 106426511 Help Entry 106426511         CDS       T04128                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism bna  Brassica napus (rape) Pathway bna03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bna00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     106426511  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bna03400]     106426511 DNA repair and recombination proteins [BR:bna03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      106426511 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor Motif Other DBs NCBI-GeneID:  106426511 NCBI-ProteinID:  XP_013722675 UniProt:  A0A816IEN7 LinkDB All DBs Position C3:complement(22005960..22017946) Genome browser AA seq 1357 aa AA seqDB search MAPSRRQISGRSPLVNPQRQITSFFGKSASSSSPSSSPLSNHKTPKSNPNPNSPSPSPLS NTKTPKSKPNPNSPSPSPLSNTATPKSNPNPDSPPLSNNKLPKSNPPARSPSPGPTTPSP VHPKLKKPLLVIGQTPSPPKFTETTYGDEVVGKQVRVYWPLDKKWYEGSVTSYDKGEGKH MVEYEDGEEESLDLGKERIEWVVGEKSGARFKRLRRGAASAFRRVVTDEDEDEEMGNVEE EKEDKSDGDDSSDEDWGKNVGKEVCESEEDDVELDAEDDTMDEEELVEEKDEETPSIADS RKRKKTSEVAKPGGEKKSKTDKETTFKGFKASVVEPVKQTGEADRVVKGLDDNMLDGDAL ARFGARESEKFRFMGVDRRDAKRRRPTDENYDPRTLYLPPDFVKRLTGGQRQWWEFKSKH MDKVIFFKMGKFYELYEMDAHVGAKELDLRYMKGEQPHCGFPEKNFSVNIEKLVQKGFRV LVVEQTETPDQLERRRKEKGSKDKVVKREICAVVTRGTLTDGEMVLTNPDASYLMALTEG GESLTDEKAEHNFGVCLVDVATKKIILGQFKDDQDCSALSCVLSEIRPVEIIKPANMLSS ATERTIVRYTRNPLVNNLVPLSEFWDAEKTIHEVGTFYKGIRCEPSSAYSGEEKILGDPS LNESGSSFLPKMLSELASGDKNGSLALSALGGAIYYLRQAFLDESLLRYAKFESLPYSDF SNFTEKQHMVLDAAALENLEIFENSRNGGVSGTLYAQLNQCITASGKRLLKTWLARPLYN PELIKERQDAVAILRGENLPYSLEFRKALSRLPDMERLIARIFSSIEASGRNGDKVVLYE DVAKKQLQEFISTLRGCETMVEACSSLRTSLTHDKSRRLRHLLTPGQSLPNISPFIKYFK DAFDWVEAHDSGRVVPHEGADEEYDFTCKTVKELEVSLTKHLKEQRKLLGDASIKYVTVG KDEYLLEVPESLSGSIPQDYELCSSKKGVFRYWTPTIKKLLKELAQAKSEKESALKSISQ RLIGRFCEHQEEWRQLVSATAELDVLISLAFASDSYEGVRCRPVISSSKSVDVPHLSATG LGHPVLRGDSLGRGSFVPNDVKIGGSKQASFILLTGPNMGGKSTLLRQVCLAVILAQIGA DVPAETFELSPVDRIFVRMGAKDHIMAGQSTFLTELSETAVMLSSATRNSLVVLDELGRG TATSDGQAIAESVLEHFIDKVQCRGMFSTHYHRLSMDYQTNPQVSLCHMGCQVGEGSGGV EEVTFLYRLTPGACPKSYGVNVARLAGLPDDVLQRAVIKSQEFEGLYGKNHKKADRKMAE MIKRIISGVASDSDTATSKHLLSELHYKANTYLRLNN NT seq 4074 nt NT seq  +upstreamnt  +downstreamnt atggcgccgtctcgccgtcagatcagcggaaggtctccgctggtgaatcctcagcgtcaa atcacctccttcttcggcaaatccgcttcatcttcttctccgtcttcatcgccactctcc aatcacaaaacccccaaatctaaccctaaccctaattctccgtctccgtcgccactctcc aacaccaaaacccccaaatcaaaacctaaccctaactctccgtctccatcgcctctctcc aataccgcaacccccaaatctaaccctaaccctgattctccgccactctctaacaataaa ctccccaaatcgaatcctcctgcacgtagtccaagccccggtccgacgactccttctcct gtacatcctaagctcaagaagccacttctagtcatcggacagactccttcgcctccgaaa tttacggaaactacgtatggagacgaggtggtggggaagcaagttagggtttactggccg ttggacaagaaatggtatgaagggagcgtgacttcgtacgataagggtgaaggtaagcat atggttgagtatgaagacggggaagaggagtctttggatttagggaaggagaggatcgaa tgggtggttggggagaaatcaggagcgaggtttaagcgattgagacgaggcgctgcttcg gctttcagaagagttgtgacggatgaagatgaagatgaggagatgggtaatgtggaagaa gagaaagaagataaaagtgatggtgatgattctagtgatgaggactggggaaagaacgtg gggaaggaggtgtgtgagagcgaagaagatgatgtggagttggatgctgaggatgatacg atggatgaagaagagctggtggaggagaaagatgaagaaactccttccatagctgactct agaaagcggaagaagactagtgaagtagcgaaaccaggtggtgagaagaaaagcaagact gataaagaaactacctttaaaggttttaaggcttctgttgtggagcctgtgaagcagact ggagaagctgatagggtggtcaagggtttggatgataacatgttggatggggatgctctg gctcgatttggtgcgcgtgaatctgagaaatttcgcttcatgggagtagaccgaagagat gcaaaaaggagacgccctacggatgagaattatgatccgaggacactctaccttccacct gattttgtaaagagattaacgggaggccagagacaatggtgggagtttaaatcaaaacat atggacaaagttattttcttcaagatgggtaaattctatgagctttatgagatggatgcg cacgttggggccaaggaacttgatttacggtacatgaagggagaacaacctcattgtgga tttcctgagaagaacttttctgtaaacatcgagaaattagttcaaaagggctttcgggtt ttagtcgtggagcaaacagaaacacctgatcagctggagcgacgccgaaaagagaaaggc tccaaggataaagttgtgaagcgtgaaatatgtgcagttgttacaagaggcacgcttaca gatggggagatggtattaactaatccagatgcatcttatctgatggcgttgactgaagga ggagagagtttaactgacgagaaagcagagcacaattttggtgtatgtttggttgatgtt gcaacaaagaagataatcctggggcagttcaaggatgatcaagattgcagtgcattgtct tgcgtgctctctgagataaggccggtggaaattattaaaccagctaatatgttgagttct gcaacagagagaacaatagttagatacaccagaaatcccttggtaaacaatctggttcca ctttctgagttctgggatgcggagaagaccatacatgaagttggaactttctacaaagga atcagatgtgaaccgtcttctgcttattccggtgaggaaaagattctaggggatccatcc cttaatgaaagtggttcaagcttccttccaaaaatgttgtctgaattagcatctggagat aagaatggtagcctggcactctctgctcttggtggtgccatttactacctgagacaagct ttcttggatgagagtctacttagatatgccaagtttgaatccctgccatactctgatttc agcaactttactgagaaacagcacatggttcttgatgctgctgctcttgaaaaccttgag atatttgaaaacagcagaaatggaggcgtttcggggacgctgtatgcacaattgaatcaa tgtatcactgcgtctgggaaacggttgctgaaaacatggctggcaagacctttatataat ccagaactgattaaggaacgccaagatgctgtagcaattcttcggggggaaaatctccca tactcgctggaattccggaaggcgctgtcaagacttccagacatggagcggttgattgca cgtatcttttctagcattgaagctagtggaagaaatggagataaagtggttctatatgag gatgtagcaaagaagcagctacaagagttcatatcaactctacgtggttgtgaaacaatg gtagaagcatgctcgtcccttcgtactagtttgacgcatgataaatccagacgcctgcgt catttgcttactcctggtcaaagtcttccaaacatatcacccttcattaagtatttcaag gatgcttttgactgggtagaagctcacgattctggacgtgtagtacctcatgaaggagct gatgaagaatacgattttacctgcaaaacggtaaaagaattggaagtcagtttgacgaaa catctgaaggagcaacgaaaattactcggagatgcatcgataaagtatgttacagttggg aaagacgaatatctcttggaagttcctgaaagtttaagtgggagtattcctcaggattat gaattatgctcatccaaaaagggtgtctttcgatattggactcctaccatcaagaaatta ttaaaagagctagcacaagcgaaatctgaaaaagagtcggctctaaagagcatttcgcaa agattgattggacgtttctgcgagcatcaagaagaatggagacaactggtttctgcaaca gctgagctagacgtgttgatcagcctcgcttttgcaagtgattcttacgaaggagtaaga tgccgtccagtaatatcaagttctaaatctgttgatgttccgcacttgtcagccactggt ctagggcatccagttctgaggggtgattcattaggcagaggctcttttgtaccaaatgat gtaaagattggtgggtctaagcaggccagcttcatcctcctcacaggccctaatatgggt ggaaaatcaacccttcttcgccaagtttgcttggctgtgatcttggctcagattggagca gatgtcccagcagaaacctttgagctttcgcctgttgacagaatatttgtccggatgggt gcaaaagatcatattatggcaggacaaagcacgtttttaacagaactatcagaaactgct gtaatgctgtcatcagcaactcgaaactctctggtggtgctagatgagcttggacgagga acagccacatcagatggacaagccattgcggaatccgtacttgagcactttatagacaaa gtgcagtgtagaggaatgttctctactcattatcatcgtctctctatggattatcaaacc aatccacaggtatcgctttgccatatgggatgtcaagtgggagaaggaagtggtggagtg gaagaagttacatttctctacagattgacgcctggtgcatgtcctaaaagctatggagtt aacgttgctcgcttagctggtcttccagatgatgtacttcagagagccgtgataaaatcc caagagttcgaaggcttatatggtaaaaaccataaaaaggctgatcgtaaaatggcagaa atgataaagcggatcatcagtggtgttgcatcagattctgatactgcaacttcaaagcac ttgctgtctgagctacactacaaggctaacacttatctccggctaaacaattga

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