Brassica napus (rape): 106428022
Help
Entry
106428022 CDS
T04128
Name
(RefSeq) ABC transporter B family member 5-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106428022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bna02000
]
106428022
04147 Exosome [BR:
bna04147
]
106428022
04090 CD molecules [BR:
bna04090
]
106428022
Enzymes [BR:
bna01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
106428022
Transporters [BR:
bna02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
106428022
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106428022
CD molecules [BR:
bna04090
]
Proteins
106428022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
RsgA_GTPase
Zeta_toxin
AAA_16
AAA_21
AAA_15
AAA_30
AAA_25
SbcC_Walker_B
nSTAND1
DUF815
DUF2585
Motif
Other DBs
NCBI-GeneID:
106428022
NCBI-ProteinID:
XP_048620413
LinkDB
All DBs
Position
C7:6793790..6800037
Genome browser
AA seq
1256 aa
AA seq
DB search
MVDVSSFETSHVHSRSPTQSEMKKGIIEEKAKTVPFYKLFSFSDSTDVLLMIVGSIGAIG
NGLGFPLMTLLFGDLIDTVGRNLFTNDIVELISKICLKFVYLGLGTFVAAFLQVSCWVIT
GERQAARIRSLYLKTILRQDIVFFDVETNTGEVVGRMSGDTVLILDAMGEKVGKFIQLFV
TFLGGYALAFVKGWLLTLVMLTSIPLLAMAGAATSLIFTKASSQQQAAYAKASTIAEQTC
GSIRTVASFTGEKQATSSYKELINSAYKSSVKQGLSTGLGFGVMFLVFFCSYALAIWFGG
EMILRKGYTGGAVINVMIIVVASSMSLGQAAPCLTSFAAGQAAAYKMFETIKRKPVIDSF
DLNGKVLEDIQGEIELRDVCFSYPARPREEVFGGFSLMIPSGKTTALVGESGSGKSTVIS
LIERFYDPNSGQVLIDGVDLKEFQLKWIRGKIGLVGQEPVLFSSSIMENIGYGKEGARVQ
EIEAAAKLANAAKFIDKLPWGLETMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEAT
SALDAESERVVQEALDRVMVNRTTVIVAHRLSTVRNADMIAVLHRGKIVEEGSHLELLKD
HEGAYSQLIRLQEINTESRRLEISNGQQDGSIRNESSRGNSVSRMHNDDGSVSVLGLLAG
QENTEKPKDMPQDVSITRIAALNKPEAPILILGTLVCALDGAIFPIFGLLFAKVIIAFFQ
PPHELRSDSRFWSIIFVLLGVLSLVVYPIHMSLFAVAGGRLIRRIRSMCFEKVVHMEVGW
FDEPENSSGAMGARLSADAALIRTLVGDSLALTVKNVASAVAGIIIAFVISWELAVIILV
MIPLTGINNYVQVKFMKGFSADAKTKYEEASQVANDAVGSIRTVASFCAEEKVIEMYKKR
CEDSIKSGTKQGVVAGLGFGLSFFVLYSVYAACFYAGARLVKDGRTTYNGVFQVFLALTM
TTIGISAASSFAPDSGKAKSAAVSVFGIIDRKSKIDSRDESGMVLENVKGDIDFCHIEFA
YQTRPDIQIFRDLCFSIRAGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGVELKK
LQLKWLRKQMGLVGQEPVLFNDTIRANIAYGKGGEEATEAEIVAASELCNAHKFISSIQQ
GYDTVVGERGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDQVMV
NRTTIVVAHRLSTIKNADVIAVVKNGVIAEKGTHETLMNIKGGVYASLVQLHMSAF
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatgtatctagttttgaaacaagtcatgttcattcaagaagtcccacacagtcg
gagatgaagaaggggataatcgaagagaaggcaaagacggtaccattctacaaactgttt
tctttctcagattctaccgatgtgttgttgatgatcgttggttcgatcggagctatcgga
aacggtcttggttttccgttgatgacattattgtttggtgatcttattgatacggttggt
cgaaacctattcacaaacgacattgttgagttaatctccaagatttgtttaaaatttgtc
taccttggacttgggacatttgtagcagcctttcttcaggtgtcttgctgggtgattacg
ggagaaagacaagctgcaaggataaggagtttatatctgaagacaattctaagacaagac
attgtattcttcgatgtcgaaacaaacacaggcgaagttgttggtcgtatgtcaggtgat
actgttcttatactagatgctatgggcgagaaggttgggaaatttatacagttgtttgta
acattcttgggtggatatgcattagcgtttgtgaaaggatggttacttacacttgttatg
ttaacctcaattcctcttctagctatggctggtgcagctacgtcgcttattttcactaaa
gcttcttctcaacagcaagctgcttatgccaaagcatcaactattgctgaacaaacttgc
gggtctattcgaaccgttgcttcattcacgggagagaagcaggcgactagtagctacaaa
gagttgataaactcggcctataaatcgagtgtcaagcaaggtctctctacgggtttaggg
tttggagtaatgttcttggtgttcttttgtagctatgctttggctatatggtttggtgga
gagatgatactcagaaaagggtatacaggtggtgcagtgattaatgtaatgatcattgtg
gtcgcgagttcgatgtctttagggcaagcagcgccatgtctaacctcatttgcagctggt
caagctgcagcttataaaatgtttgaaacaataaaaagaaagccagtgattgattctttt
gatctaaacgggaaggttttagaagatatacaaggcgaaatagagctgagagatgtgtgt
tttagttaccctgcaaggcctagagaagaggtctttggaggattctctctgatgatccca
agtggcaaaactactgctttggtaggagaaagcggcagcgggaaatctactgtgatcagt
ttaatagaaaggttctatgatccgaattctggccaagtgcttattgatggtgttgacttg
aaggagtttcagctgaaatggattagaggaaagattggattggttggtcaagaaccggtt
ctgttttcttcaagtataatggagaatattgggtacgggaaagagggagcaagagttcaa
gagatagaagcagctgcaaagctagcaaacgcagctaagtttatcgataagttgccttgg
ggtttggagacaatggtaggtgaacatggaactcagctctcaggaggacagaaacagagg
attgcaatcgctagggccatacttaaagatccaaggattttgctgttagatgaagcgaca
agtgctcttgatgcagaatccgaacgagtggttcaagaagctttagatagggtgatggtt
aaccggactactgtgattgtcgcacatcggttaagcacagtgagaaatgctgatatgatt
gctgttcttcaccgtggaaagatagttgaagaaggttcacatttggagttactcaaggat
catgaaggggcttattcacaacttatacggctacaagagataaacacagaatcaagacga
ttagagatttcaaatggacagcaagacggatctatcaggaatgaatcatcaagaggaaat
agtgtcagtaggatgcataatgatgatggatctgtttctgttcttggtttacttgcagga
caagaaaacactgaaaagcctaaagatatgccccaagatgtgtcgattacacgaattgct
gctcttaacaaaccggaggctcccattctcatacttggaaccttagtatgcgcacttgat
ggcgctatattcccaatcttcggactcctctttgctaaagttatcatagctttcttccaa
ccacctcatgagctgaggagcgattcgagattctggtcgataatatttgtgcttcttggt
gtactctctttggtagtgtatccaatacatatgtctttgtttgctgtagctggggggaga
ctgattcgtaggataagatcaatgtgttttgagaaagttgttcacatggaggttgggtgg
tttgatgagcccgagaactcgagtggtgccatgggagcaaggctctctgctgatgcagcc
ttgatcaggacacttgtgggcgactctttggctctaactgtcaagaacgttgcatccgca
gtggcgggaataatcatagcttttgtgattagctgggagttagctgttattatcttagta
atgattcctttaacaggaatcaataattacgttcaggttaagttcatgaaaggcttcagt
gcagacgcaaagacaaagtacgaggaggcgagtcaagtagcgaacgatgcggttgggagt
ataagaacggttgcatctttctgtgcggaggagaaagtgatagagatgtataagaaacga
tgtgaagattcgatcaaatcgggaacgaagcaaggagtagtcgcaggattagggtttggt
ctctccttcttcgttctttactctgtctatgctgcttgtttctacgcaggtgctagattg
gttaaagacggaaggacaacctacaacggtgtttttcaggttttcttagcattgacgatg
acaacaattgggatttctgcggcgagttctttcgctcctgattcaggcaaagctaagagt
gctgctgtttcagttttcggaatcatcgataggaaatcaaagatagactcgagagatgaa
tcagggatggtgttggagaatgtaaagggagatatcgatttttgtcacatagagtttgct
taccaaactagacctgatattcagatatttcgtgatctttgtttctccattcgtgccgga
aagactgttgctttggtcggagaaagtggatcaggcaaatctacggttatatctctgtta
cagaggttttacgatccagattcgggtcatatcactttagacggagttgagctcaagaag
ctgcaactgaaatggctgagaaaacaaatggggcttgtagggcaagagcctgtactgttc
aacgacacaatacgagccaacattgcttatggaaagggaggagaagaagcaaccgaggct
gagatcgtagctgcttccgagctctgtaatgctcataaattcatctctagtatacaacag
ggttacgatacggtggtcggggagagagggatacagttatcaggaggacagaagcagcgc
gtggcaattgcacgtgccatcgtgaaagagccgaagatcttgttactggacgaagcgacg
agcgcgttggacgcagaatcagagcgtgtggttcaggacgcacttgaccaggtgatggtg
aaccggaccaccatcgtggtggctcacaggctttcgacgatcaagaatgctgacgtcatc
gccgtagtgaagaacggtgtgatcgcggagaaagggacgcacgagacgttgatgaatatc
aaaggtggtgtttatgcttccctcgttcaacttcacatgagtgctttctaa
DBGET
integrated database retrieval system
