Brassica napus (rape): 106428773
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Entry
106428773 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106428773 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106428773
03036 Chromosome and associated proteins [BR:
bna03036
]
106428773
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
106428773
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106428773
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106428773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
DUF5917
Motif
Other DBs
NCBI-GeneID:
106428773
NCBI-ProteinID:
XP_048601397
LinkDB
All DBs
Position
C1:complement(6557649..6567029)
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AA seq
1795 aa
AA seq
DB search
MGSSVITSLSLSFKQVPPTAVPAFLDCVLSSTGVSPSSLFESLIKELPFRAEEKKFDSDD
CNHIASLVAGLCHLLKSFGFGTEDNHNALQLFVWRVFIPLMKMVRAYDLDMLNKIIQLFF
DVVVETSALDILRVSLVPFLLRSVGVSMGMLQHEESDFIRWGELLLGGSLDINDNDGNYV
GYLSASFPIPLSCHLLNLILNAAFQSHQADSKVEDFAAGMLWDLCNITERLLSQSVEHRS
CAVRFLLPAVFKGFSSQSSLKISLQGNVYILSRNGFKKRIWECCKKLFSVGSIERRDAYS
VLSLCLSSDGALSYVSEKDPVDFDFRSDQEFWEEIKKGLVFDESLVRKQSLHILKSVLSI
SEVSKTSSEKKPEGNSVHRALTKKEMWAEKEAKSLGVGELYGSVESALTSQQQQWQAFVL
LYEMLDEYGTHLVEAVWSNQIDLLIKSSSRYDEETEIFNWLEVLWNRGFRHDNPLVRCTV
MESFMGIEWRRYKTCTQSMSQTFVLGPFIEALNDSVHHKDFGLKGIYTSRTIEGGAQYVC
AYTSCLNPRNRIGFLINLASLAKKQSFGRAGFMALVQCIVSTAYVVGGYGNKEMEHLENG
FSGTPLEPSSEHLSQDEMSHILDVLKFVAESSRQHFNHKYRTRVCQKVLETAVSVVNPCE
VPLGTLLQFVSAIPREFTDHNGSLRKLMLEWLQGCNRNTSDSLCTDGTRLVASLHEYLKE
FVSDHVEGFDDEDLEAWESQTKRWARVFFLTVNDEEHLADIITFVQNSGVSFFQEKNHLE
RAPAKFLIFILSMLLELQNMQDGVSELSSSVKSKSCIGIVEENGKQIVGSASVINEKFAA
VLLSILKQLVSFADSSCSIFWSHTTVENGVLSGSIIGKLGGPSQRRLSVPTTTAVLEAVT
SVKIIGLISSYCGQVTSGVTELKLALAFFWKFVQHTLSSQSCNSEAEAEIYLAAFEALAA
VLNAFVSLCSARAFNLLENDNTLLDMVNGEYWLQASVPAFLHNINHLLTAGLLARSRRAV
LLSWKWLCVESLLSVMNVLDVRRTPGDRTSFFSDDTVKSIFYDIVESLENAGEGSALPML
KSVRLALGILASGKSSLDGFSGVDTQTMWQLVKSCWILHISCKKRRVAPIAALLSSVLHS
SLFSNKDMHVAEDGDGPLKWFVEKVLEEGQKSPRTIRLAALHLTGLWLMYPRTIKYYIKE
LKLLTLYGSVAFDEDFEAELCDNNDARTEVSLLAKNPDPELTEVFINTELYARVSVAGLF
QKLADLANMAEPACQNQDYQDAIVAGKLFLLELLDAAVHDKDLAKELYKKYSAIHRRKIR
AWQMICIMSRFVSNDIVGQVMDSVHICLYRNNLPAVRQYLETFAINIYLKFPPLVKEQLV
PVLQNYDTKAQQALSSYVFIAANVILHAEKMAQQTNLRELLPPIIPLLTSHHHSLRGFTQ
LLVHRVLFRLFPPLESTSSQTIPLEKLSFENLKSYLDKNPDCSRLRSSMEGYLDAYDPTT
SATPAGVFVNRVEESEFECVPTCLMDNVISFLNDVREDLRASMAKDIVTIKNEGFKIEEE
PNRRLMTSTSDEESLSEPSSLDFQKKITLSKHEKQDATSTTSVLQNGETYKRLFEMEKED
ELVSQLLRSRSMEVERLKSGRQSLILVASLVDRIPNLAGLARTCEIFKASGLVVGDASII
HDKQFQLISVTAEKWVPIVEVPVNSLKLFLEKKKREGFSILGLEQTANSVSLDKYQFPKK
TVLVLGREKEGIPVDIIHVLDACVEIPQLGVVRSLNVHVSGAIALWEYTRQQRIQ
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgggctcctctgtgattacttcactgtcgctgagcttcaaacaagttcctccaacagct
gttcctgcttttctcgactgcgtcctaagctccacaggcgtatctccctcctccctcttc
gaatcactcatcaaagagttgccttttcgtgcggaggagaagaagttcgattctgatgat
tgcaaccacattgcttcattggtggctggtctttgtcatctactaaagagttttggcttt
ggtactgaggataatcataatgcgttgcagttgtttgtgtggagagtgtttattccactg
atgaagatggttcgtgcttatgacttggatatgcttaataagattatacaattgttcttt
gatgttgtggtcgagactagcgcattggatatactgagagtgagtttggtgccttttcta
ctgagatcagttggggtttcgatgggaatgcttcaacacgaagaatcagatttcatcaga
tggggagagctgttgcttggtggctctttggatataaatgataatgatggaaactacgtt
ggatatttgtctgcgtcatttccgattccactgtcgtgccatcttttgaacctgattctg
aacgctgcttttcaaagtcaccaagcggattcaaaggtggaagattttgcagctggtatg
ctttgggatttgtgtaatattactgagaggcttttgtcacaaagtgtagagcatcgttcg
tgcgctgttaggttcctcctccctgctgttttcaaggggttctcttctcagtcttctctg
aagatctcacttcaaggaaatgtgtacatactttcaaggaatggcttcaagaaaaggatt
tgggaatgctgcaagaagctgttctcggttggatcaatagagagaagggatgcttacagt
gttctctctttgtgtctttcttctgacggagccctaagttatgtctcagaaaaagaccct
gtcgattttgactttaggtctgatcaagagttttgggaagaaatcaagaaaggcttggtt
tttgatgagagcttagtaaggaagcagtcattgcatatactgaaatcagttttatccata
agcgaagtgagtaagacgagttctgagaagaagccagaagggaactcagttcatcgtgct
ttgacgaaaaaggagatgtgggcagagaaggaagccaagtcacttggtgtgggagaattg
tatggctctgttgaatctgctttgactagtcagcagcagcagtggcaagcttttgtgctc
ctgtatgagatgcttgacgagtacggcactcatctcgtagaagcagtgtggagtaaccag
attgatttattaatcaaatcatcttccagatatgatgaggaaactgaaatatttaattgg
ttagaggttctttggaatcgaggctttcgtcatgataatcctctagtcaggtgcacggtc
atggaatcttttatggggattgagtggagaagatacaaaacatgtacacaatcgatgtcc
caaactttcgttcttgggcctttcatagaggctttgaatgattctgtacaccacaaagac
ttcgggctgaaaggaatctatacctcaagaacaattgaaggtggagctcaatatgtgtgc
gcgtacacaagttgcctcaacccaaggaatcggattggatttttgatcaacttggcatct
cttgcaaagaaacagtcttttggtagggctggatttatggctctcgtacagtgtattgtg
tctacagcatatgtggttggaggatacgggaacaaggagatggagcatcttgaaaatgga
ttctctgggactcctctagaaccttctagtgaacatttaagccaagatgagatgtcacat
atactggatgtcttgaagtttgttgcagagagcagcaggcaacattttaatcacaaatac
cgtactcgagtttgccaaaaagtgttggaaactgctgtttcagtggtgaacccttgtgaa
gttcctcttggaacactattgcagtttgtttcagcaattcctcgggagtttactgaccat
aatggttcattgcggaaattgatgctagaatggctccaggggtgcaacagaaacacttcc
gacagtttatgtactgatggcactcgtcttgtagcgagccttcacgagtatctgaaagaa
tttgtcagtgatcatgttgagggttttgatgatgaagacttggaagcatgggaatcccaa
acaaaacgatgggcaagagtatttttcctcacagttaacgatgaagaacatctcgccgat
atcataacgtttgtgcaaaatagcggcgttagttttttccaagagaagaaccatttagaa
cgagcacctgcgaagttcttaatctttattctgagtatgctcttagagctccagaacatg
caagatggagtctctgagctgagttcttcggtgaaaagcaagtcatgcattggcattgtt
gaggaaaatggcaagcagattgttggcagcgcttcagttattaatgaaaagtttgctgct
gttctcttatcgatactgaagcagctggtttcatttgctgattcatcttgctcaatattc
tggtctcacactactgtggagaatggtgttctgtctggttctatcataggaaaactaggg
ggtccaagtcaacgccggctatctgttcctactacaacagctgtactagaagctgtaaca
tcggtgaaaattattgggttgatctcgtcatactgtggtcaagtcactagtggtgttact
gaactcaaattagcattggctttcttttggaagttcgtccagcatacgctatcatctcaa
agttgtaattctgaggctgaagctgagatctatcttgcagcatttgaagcgctagctgct
gtactgaatgcatttgtgtccttgtgctcagctagagctttcaaccttttagaaaatgat
aatacattattagatatggtgaatggtgaatattggttacaagcttcagttccggctttc
ctccacaacattaaccatcttctcacagcaggacttctggcaagaagtagaagggctgtt
ctgcttagctggaagtggctttgtgtggagtctctattatcagtcatgaatgttcttgat
gtcagacgtactccaggggatagaacgtctttcttctcagatgatacagtcaaaagcatc
ttttatgatattgtagagagccttgaaaatgctggggagggttctgctttgcctatgctg
aaatctgtcagacttgctttggggatacttgcgtctgggaaatcatctcttgatggtttc
tcgggtgtagatactcagacgatgtggcagctggtcaaatcatgttggatattgcatatc
agctgcaagaagagaagggtcgcacccattgctgcgcttttgtcttcggtgttgcattct
tctttgtttagtaataaagacatgcacgtagctgaagatggagatggaccgctgaagtgg
tttgttgaaaaagtacttgaggaaggtcagaaaagtccacgcacaattcgacttgcggcc
ttgcaccttacaggactgtggctcatgtaccctaggacgatcaagtactacattaaagaa
ttgaagcttctgactctctatggctctgttgcatttgatgaggattttgaagctgagtta
tgtgacaataatgatgcaagaactgaagtatcattactggcaaaaaacccagaccctgaa
ctgacagaagtctttatcaacacggagttgtatgcacgtgtgtcagtcgctggtctgttt
cagaagctggctgatttggccaatatggccgaaccagcttgtcaaaatcaagattaccag
gatgctattgtggctggaaagttgtttctattggagcttcttgatgcggcggtgcatgat
aaagacttggcaaaggagctttacaagaagtatagtgctatccacagacggaaaatacgc
gcttggcagatgatatgcattatgtcgcgatttgtcagcaatgacattgttggccaagtc
atggacagtgtgcacatttgcttatatagaaataacctgcctgctgttcgacaatacctg
gaaacatttgccataaacatttacctgaaatttccaccattggttaaagagcagttagtt
cctgtactgcaaaattacgacactaaagctcagcaagctctctcgtcctatgtcttcatt
gcagccaatgtcatccttcatgccgaaaagatggctcaacagacaaatttgagagaactt
cttccaccaataattccgttattaacttctcatcatcacagcttacgaggtttcactcag
ttattagtgcatcgggtactctttagactgtttccccccttggagtccacatcctctcag
acaataccgttggagaagctctcttttgagaatttgaagtcttacctggacaagaatcct
gattgttcgagattgcgatcatcaatggaaggatatcttgatgcctatgatcccaccaca
tctgccactccggctggtgtttttgtcaatcgtgttgaggaaagtgagtttgaatgtgtt
ccaacatgcctcatggataacgtgatttcttttctgaatgatgttagggaagatcttcgt
gcttccatggcaaaagacattgttaccattaagaatgaaggcttcaaaatcgaagaagag
cccaaccgtcggttgatgacttccacatcagatgaagaaagtctttctgagccatcttcg
ttggacttccagaagaagatcactctgtctaaacatgagaagcaagatgctacttcaaca
acttctgtgctccaaaacggggaaacttacaagcggctctttgaaatggagaaagaagac
gagcttgtgagtcagctgttacgatctagaagcatggaggtggagaggttgaaatctggc
cgacagagtttgatccttgtggcttcattggttgatcgtattcctaatcttgctggatta
gcccggacatgcgagatatttaaagcatcgggtcttgtcgttggagatgcaagcataata
cacgacaaacagttccaactaatcagcgtgactgctgagaaatgggttccaatcgttgaa
gtcccagtgaacagtttaaaattgttcttggagaaaaagaaaagagaaggcttctcaatc
ttgggactggagcagacagctaacagtgtttctctggacaaatatcagttcccaaagaag
actgttttggtgctgggtcgggaaaaggaaggcatacctgtggatataatccatgtactg
gacgcttgtgtggagataccacaactaggagttgttaggtccctcaacgtccacgtcagc
ggcgccattgctctctgggaatacactcgccaacaacgcattcaatag
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integrated database retrieval system
