Brassica napus (rape): 106435806
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Entry
106435806 CDS
T04128
Name
(RefSeq) protein EXPORTIN 1B
KO
K14290
exportin-1
Organism
bna
Brassica napus (rape)
Pathway
bna03008
Ribosome biogenesis in eukaryotes
bna03013
Nucleocytoplasmic transport
bna03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106435806
03008 Ribosome biogenesis in eukaryotes
106435806
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106435806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106435806
03009 Ribosome biogenesis [BR:
bna03009
]
106435806
03016 Transfer RNA biogenesis [BR:
bna03016
]
106435806
03036 Chromosome and associated proteins [BR:
bna03036
]
106435806
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106435806
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
106435806
Pre-60S particles
106435806
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106435806
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106435806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Mesothelin
Motif
Other DBs
NCBI-GeneID:
106435806
NCBI-ProteinID:
XP_048601960
LinkDB
All DBs
Position
C1:complement(50724994..50732060)
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLRDLSQPIDVTLLDATVESFYATGSKDERAAADNILRELKANPDTWLQVVHILQS
TRSTHTKYFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSGDEGSFRAERLYVNK
LNVILVQIVKHEWPAKWRSFIPDLVKAAKTSETLCENCMAILKLLSEEVFDFSKGEMTQQ
KIKEMKESLNSEFLLIHELCLYVLSASKRPELIRSTLSALHAYLSWIPLGYIFESPLLET
LLKFFPEPAYRNLTLQCLSEVAALNCGDFYNGQYVKMYGIFMGQLQAMLPLNINIPEAYS
NGSDEEQAFIQNLALFFTSFFKSHIKVLESAPEIISLLLVGLEYLISISYVDDIEVFKVC
LDYWNSLVSELFTLHHHVGHPGLTPSLFGLQMACLPRTAGSIKPEVTERQKLYADPLSKL
RGLMISRMAKPEEVIIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLGHDDTERQM
LSKLSKQLSGEEWAWNNLNTLCWAIGSISGSMDVDQENRFLVMVIRDLLSLCEIIKGKDN
KAVIASNIMYVVGQYSRFLRAHWKFLKTVVHKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVILQVGEKEPFVSELLSGLVTIVGDLEPHQIHTFYESVGSMIQAETDPQKRSEYIQR
LMDLPNQKWTEIIGQARQNADILKDPDMIRTVLSILQTNTRVATSLGTHFLPQISLIFLD
MLNVYRMYSELVSSNIAEGGPYASRTSVVKLLRSVKREILRLIETFLEKAEYQPHIGKQF
VPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKVNMQDEVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATFCFPALVQLSSEQLKLVMDSVIWAFRHTERNIAETGLNL
LLELLKKFQKSDFSNQFYRTYFMQIEQEIFAVLTDTFHKPGFKFHVLVLQHLFSLVESKS
LTEPLWDASTVLQQYPNNAAFVLEYTIKLLSSSFPNMTTSEVTQFVNGLYESRSDIARFK
NNIRDFLVQSKEFSAQDNKDLYAEEAAAQIERDIQKMLLIPGLIAPNEIQDDMADS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgagaagttacgcgacttgagtcagcctatcgacgtcaccttgctcgacgct
accgttgaatccttctacgcgacgggatcgaaggatgaaagagctgcggcggataatatt
cttcgtgaattgaaagcgaaccctgacacctggcttcaagtggttcacattttgcaaagc
acgaggagtacacataccaagtactttgctcttcaggtgctggaaggtgttattaaatat
aggtggaatgctttacctgttgaacagcgtgatggaatgaagaattacatctctgaagtc
atcgtgcagctctcaggggatgaaggatctttcagagcggaaaggctttatgtcaacaag
ttaaatgtcattctggttcagatcgtgaaacatgagtggcctgcaaagtggaggagtttt
attcctgatctagttaaagctgccaaaactagcgagactttatgtgagaattgcatggct
attttgaagctcctgagcgaagaggtatttgatttctcaaaaggagagatgactcagcag
aagataaaggagatgaaagagtccctaaacagcgagtttctactcattcacgagttatgc
ctatatgttctctcagcttccaaaagaccagagcttattcgctcaacgctctctgcattg
catgcctatctttcttggattccgcttggctatatattcgagtcacccttgctggagacc
ctccttaaattcttccctgagccggcatataggaatctcacccttcaatgtctgtcagag
gttgcagctcttaattgtggggacttctacaatgggcaatatgtcaagatgtacggcatt
ttcatgggacagttgcaggcaatgcttcctttaaatatcaatatcccagaggcatattca
aatggaagtgacgaagaacaggcttttatccagaacttggcactgttcttcacttcattt
ttcaagtcacatataaaagtcctagaatctgcaccggagattatttctttactacttgtg
ggtctggaatatctcattagcatttcatatgttgatgacattgaagtattcaaggtttgt
ttggactattggaattcactagtttcggagttatttacgttgcatcatcatgtcggccac
cctggtctaactccaagtctgtttggattgcaaatggcttgccttcctcgtacggctggt
agcatcaaaccggaagtcacagagcgacaaaaactttatgctgatccattgtcaaaacta
agggggctcatgattagtcgtatggctaagcctgaagaagtgataattgttgaagatgaa
aatggaaatatagtccgtgaaactatgaaggataatgatgttcttgtccaatataagata
atgcgggagacattaatctatctctcgcaccttggtcatgatgataccgaaagacagatg
ttgagtaagctaagcaaacagttaagcggggaggaatgggcatggaacaatctgaacact
ttatgctgggctattggatctatttctggttccatggatgttgaccaagaaaacagattt
ctggtgatggttattcgtgatttgttaagtttatgtgaaatcatcaagggaaaagacaat
aaagctgttattgcaagcaacatcatgtatgttgttggacagtactcgaggttcttaagg
gctcactggaagtttctgaaaacagttgttcataagttgtttgaattcatgcatgagaca
catcctggtgttcaggacatggcgtgtgatacattcttgaaaattgttcaaaaatgcaag
cgcaaattcgttattcttcaggttggagagaaggagccatttgtatctgaacttttgtca
ggacttgttactattgttggagatcttgaacctcatcagattcacaccttttatgaatct
gttggtagtatgatccaggcggaaacagatcctcagaagaggagtgaatatatccagagg
ttgatggatctccctaatcagaaatggacagaaattataggacaagcacgtcagaatgca
gatatccttaaagacccagatatgatacgtactgtgctaagtatcctacagacaaatacg
agagttgcaacttcgctaggaacacatttcttacctcaaatctcgttgatcttcttggat
atgctgaatgtttatagaatgtacagtgaactcgtgtcgagcaacattgctgagggtggc
ccgtatgcttcgaggacatctgttgttaaacttttaagatctgttaagagagaaatcctt
aggttgatagaaacgtttctagagaaagcggaataccagccacacattggcaaacagttt
gttccaccaatgatggatccagttcttggtgactatgcaagaaacgttccagacgcaagg
gaatcagaagtcttatcactctttgcgacaataataaacaagtacaaggttaatatgcaa
gatgaagtgcctcgcatttttgaagctgttttccagtgcactttggagatgatcacgaag
aatttcgaagattatccagagcaccgcctcaagtttttctcgttacttcgtgctattgcg
acgttctgtttccctgccttggtacagttgtcaagtgagcaactgaaactagtgatggat
tcagttatctgggcgtttaggcataccgaaagaaacatcgcagaaacagggcttaatctc
ttgctggagctgctgaaaaagtttcagaaatctgacttctctaaccaattctaccggaca
tacttcatgcaaattgagcaagagatatttgctgtcttgaccgataccttccacaagcct
gggttcaagtttcatgtcttggtgctacagcatctattttccctggttgagagcaagtct
ttgacggaacctttgtgggatgcttcaacggtgcttcagcaatacccaaacaatgctgcc
tttgttcttgaatacaccatcaagcttctaagctcatcattcccaaacatgactacatca
gaggtgacgcaatttgtgaatggactttacgagtcgagaagtgacattgcgagattcaag
aataacatacgagacttccttgtacagtccaaggaattctctgctcaggataacaaagat
ctatatgctgaagaagctgctgctcaaattgagagagatatacaaaagatgcttttgatt
cctggtcttattgctccaaacgagattcaagacgacatggctgattcataa
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