Brassica napus (rape): 106436375
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Entry
106436375 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: tryptophan synthase beta chain 2
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
bna
Brassica napus (rape)
Pathway
bna00260
Glycine, serine and threonine metabolism
bna00400
Phenylalanine, tyrosine and tryptophan biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01230
Biosynthesis of amino acids
Module
bna_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
106436375
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
106436375
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
106436375
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GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
106436375
NCBI-ProteinID:
XP_013732792
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All DBs
Position
C6:20913254..20915791
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AA seq
500 aa
AA seq
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MTSQLLLPPNPFTRPVSAKVFLTGDDLTLIRKSNQATRVSNGFSLRAKAALRSNHSSSVE
IPNQWYNLIADLSVKPPPPLHPKTLEPIKPEDLSHLFPNELIKQEATLERFIDIPEEVLE
IYKLWRPTPLIRAKRLEKLLQTPARIYFKYEGSSPAGSHKPNTAVPQAYYNAKEGVKNVV
TETGAGQWGSSLAFASSLFGLDCEVWQVANSYHQKPYRRLMMQTWGAKVHPSPSDLTEAG
RKILESDPSSPGSLGIAISEAVEVAARNEDTKYCLGSVLNHVLLHQTVIGEECIKQMEDF
GETPDVIIGCTGGGSNFAGLSFPFIREKLKGNISPVIRAVEPSTCPSLTKGVYAYDFGDT
AGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYEQGFMEAISIPQIECFQGAIQ
FARTEGIIPAPEPTHAIAATIREALRCKETGEAKVILMAMCGHGHFDLSSYDKYLKGELV
DLSFSEDKIRESLSKVPHVV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcagttgcttttgccaccaaacccattcaccagaccagtctcggctaaagtt
ttccttacaggtgatgacttaactctgataagaaagtcaaaccaagcaacaagagtttca
aatggatttagcttaagagcaaaagcagctttaagatctaatcatagctcatctgttgag
attccaaatcaatggtacaatcttattgccgatctttctgttaagcctccaccacccttg
catcccaagactttggaaccaatcaaacccgaagatttatctcatcttttccctaatgag
ttaatcaaacaagaagcaacgttagagaggtttatcgacatccctgaagaagttcttgaa
atctataagctctggcgtccaactcctctaatcagagcaaagagattggagaagcttctt
cagacacctgcaaggatttacttcaagtatgaaggtagtagcccagctggttcacacaaa
cctaacacagcggttcctcaggcttattacaacgcgaaagaaggtgtcaagaacgttgtg
actgaaaccggcgctggccaatggggcagttctttagcctttgcctctagtctatttgga
cttgactgcgaagtgtggcaagtggccaattcataccatcaaaagccataccgccggtta
atgatgcaaacgtggggagcaaaggttcatccatctccgtctgatctcactgaggcgggt
agaaaaatccttgaatccgacccatcaagcccgggaagtttaggcattgcgatctcagaa
gctgttgaggttgcagctagaaacgaggatacaaagtactgtttaggaagtgtactgaac
catgtgttgttacaccagacggttattggagaagaatgcataaagcagatggaagatttt
ggcgaaacgcctgatgtgatcataggatgtactggtggaggttcaaattttgctggtttg
agttttccttttatccgggagaaactcaaaggcaatatcagccctgttataagagctgtt
gagccatctacttgtccttccttgaccaaaggagtttatgcttatgattttggagataca
gctggactgactcctttgatgaagatgcatactttaggacatgacttcattcctgatcct
atccatgccggtggattacggtaccatgggatggcacccttgatctcacatgtttatgaa
caaggtttcatggaagcaatctcaattcctcaaatcgaatgtttccaaggtgccattcag
tttgcaagaacggaagggataataccagcgccggaaccaactcacgccattgcagcaacc
ataagagaagctctccgatgcaaagaaacaggagaagcaaaagtgatactaatggcgatg
tgtggtcatggccactttgacctttcctcttatgacaaatatctaaaaggcgaattggtg
gatttatcattcagtgaagacaagatacgagagtctttgtccaaggttcctcatgttgtt
tag
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