Brassica napus (rape): 106438329
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Entry
106438329 CDS
T04128
Name
(RefSeq) ribosomal RNA small subunit methyltransferase
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106438329
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
106438329
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
106438329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_31
DREV
Methyltransf_23
PRMT5
MTS
Methyltransf_2
PPS_PS
Methyltransf_4
Methyltransf_28
PCMT
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
106438329
NCBI-ProteinID:
XP_013734897
UniProt:
A0A816I3Z0
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All DBs
Position
C3:16272958..16274308
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AA seq
342 aa
AA seq
DB search
MAGGKIRKEKPKAPSNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPG
TGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPYSNRLKVIQGDVLKTELPRFDICV
ANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRHVAQPGDNLYCRLSVNTQLYARVS
HLLKVGKNNFRPPPKVDSSVVRIEPRKPQPQVNKKEWDGFLRVCFIRKNKTLGSIFRQKS
VLLMLEKNFKTLQAVRASLNGSTGEAAGMDLDDQSMGMEDDDNEMDDDDDVEMDEGQGEE
FKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKSGIHFS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcaagataaggaaggagaagcccaaggcaccatcaaaccattaccaagga
ggaatctccttccacaaatcgaaaggacagcatatcctcaagaaccctctcctcgttgac
tcaatcgttcagaaagctggtatcaagagcaccgatgtgattctcgagatcggtccaggt
actggtaaccttacgaagaagcttctagaagctggtaaagaagtcatcgctgtcgaactc
gattctcgtatggttctcgagcttcaacgccgtttccaaggaactccttattctaaccgc
ttgaaggtaatccaaggcgatgtgttaaagacggagcttcctcggtttgacatatgtgtt
gccaacattccttatcagatatcatctcctctcacgttcaagcttctcttccacccaaca
agcttcaggtgcgctgtgatcatgtaccagagagagttcgccatgagacacgttgcccaa
cctggagacaacctttactgtcgtctctcagtcaacactcagctctatgcaagagtctcc
cacctcctcaaagtcggcaagaacaacttccgaccacctccgaaggtggattcttctgtt
gttaggatcgaaccgaggaagccgcagcctcaggtgaacaagaaggagtgggatgggttc
ttaagagtctgtttcatcagaaagaacaaaactttgggatcgatttttaggcaaaagtct
gttcttttgatgctggagaagaacttcaagactcttcaggcggtacgagcttcgttgaat
ggctcgaccggagaagctgccggtatggatcttgatgaccagagcatgggaatggaagat
gatgacaacgaaatggatgatgatgatgatgtggagatggatgaaggacaaggagaagag
tttaaggagaaggttatgaatgtgttgaaggaaggtgggttcgaggagaagaggtcgtct
aagttatcacaacaagagtttctgtatcttctctcgttattcaacaagtcgggcattcac
ttctcgtag
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