Brassica napus (rape): 106446673
Help
Entry
106446673 CDS
T04128
Name
(RefSeq) probable sarcosine oxidase
KO
K00306
sarcosine oxidase / L-pipecolate oxidase [EC:
1.5.3.1
1.5.3.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna00260
Glycine, serine and threonine metabolism
bna00310
Lysine degradation
bna01100
Metabolic pathways
bna04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
106446673
00310 Lysine degradation
106446673
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106446673
Enzymes [BR:
bna01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
106446673
1.5.3.7 L-pipecolate oxidase
106446673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
GIDA
NAD_binding_8
FAD_oxidored
FAD_binding_2
Amino_oxidase
Thi4
FAD_binding_3
HI0933_like
Pyr_redox_2
Pyr_redox
3HCDH_N
ApbA
NAD_binding_2
Motif
Other DBs
NCBI-GeneID:
106446673
NCBI-ProteinID:
XP_013743903
LinkDB
All DBs
Position
A4:complement(13795024..13796508)
Genome browser
AA seq
413 aa
AA seq
DB search
MEYSGDHRFDVIIVGAGVMGSSAAYQLAKRGHKTLLLEQFDFLHHRGSSHGESRTIRATY
PEDYYYTMVSESAQLWAQAQSEIGYKVHFLTQQFDMGPKDQQSLLSVVATCRKHGLAHRV
MDSKTVSEYFSGRINIPENWIGVSTDLGGVIKPTKAVSMFQTLALKNGAVLRDNTKVANI
NKDGENEGGVIVSTVKGEKFHGKKCIVTAGAWIGKLVKTVAGIEFPVDPLETTVCYWRIK
EGHEDKFAIDSEFPTFASYGAPYVYGTPSLEYPGLIKVAVHGGYLCDPDKRPWGPGVKLE
ELKEWIKERFGGMVDTEGPVATQLCMYSMTPDEDFVIDFLGGEFGKDVVVGGGFSGHGFK
MAPAVGRILAELATEGEAGGGVEMKQFSLRRFEENPKGNAKEYPDQVILGSCL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaatattccggcgaccaccgattcgacgtgattatcgtcggagcaggagttatggga
agctctgcagcgtaccagctggcgaaaagaggccacaaaactctcctcctcgagcagttt
gacttcctccaccatcgtggctcttcccacggcgagtcacgtaccatacgcgccacttac
ccggaggattactactacaccatggtttccgagtcagctcaattatgggctcaggctcag
tccgagatcggttacaaagtccatttcctaactcaacagttcgacatgggccctaaggac
cagcagagcctcctctctgttgtcgccacgtgtcgtaaacacggcttagctcacagggtc
atggactcaaagaccgtgtctgaatatttctccgggaggatcaatatcccggagaactgg
atcggagtctcgacggaccttggcggagttatcaaaccgaccaaagcggtctctatgttc
cagaccctcgcgttaaagaacggtgccgttttgagagacaacaccaaagtggctaacata
aataaagacggtgaaaacgagggaggggtaatagtcagcacggtgaaaggagagaagttc
cacggtaaaaagtgtattgttactgccggtgcatggataggtaagctggtgaaaacggtg
gccgggatagagtttccggtggatccgcttgagacgacggtgtgttactggagaatcaaa
gaaggccacgaggacaagttcgcgatagactcagagtttcctacgttcgcgtcctacgga
gctccttacgtgtatggaactccgtctctggagtatccgggacttatcaaagtggcggtt
cacggtggttacctgtgcgatccagataagaggccatggggaccgggagtgaagctagaa
gagcttaaagagtggatcaaggagaggtttggagggatggttgatacggaaggacctgta
gcgactcagctttgcatgtactcaatgacgccagatgaggactttgtcattgattttctc
ggtggggagtttgggaaagatgtggtggtcggcggcgggttttctggtcatgggtttaag
atggcgcctgcggtggggaggatattggcggagctggcgacggagggagaagctggagga
ggagttgagatgaagcagtttagtctccggaggtttgaagagaatcctaaagggaatgcc
aaagagtatcctgaccaggtgatacttggtagttgcctttga
DBGET
integrated database retrieval system