Brassica napus (rape): 106450430
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Entry
106450430 CDS
T04128
Name
(RefSeq) ribosomal RNA small subunit methyltransferase
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106450430
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
106450430
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
106450430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_12
Methyltransf_11
Methyltransf_31
PRMT5
Methyltransf_23
DREV
MTS
Methyltransf_2
PPS_PS
Methyltransf_4
Methyltransf_28
PCMT
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
106450430
NCBI-ProteinID:
XP_048635405
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All DBs
Position
A5:complement(386935..388433)
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AA seq
345 aa
AA seq
DB search
MAGGKIRKEKPKAPSNNYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPG
TGNLTKKLLEAGKEVIAVELDSRMVLELQRRFQGTPYSNRLKVIQGDVLKTELPRFDICV
ANIPYQISSPLTFKLLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVS
HLLKVGKNNFRPPPKVDSSVVRIEPRKPQPQVNKKEWDGFLRVCFIRKNKTLGAIFRQKS
VVLMLEKNFKTLQAVLASLNGVTGEAAVMDVGDQSMGMEDDDNEMEDDDEDMEMDEGQGG
GGEFKEKVMNVLKEGGFEEKRSSKLSQQEFLYLLSLFNKSGIHFS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggaaagataaggaaggagaagccaaaggcaccatcaaacaattaccaagga
ggaatctccttccacaaatcgaaaggacagcatatcctcaagaaccctctcctcgtcgac
tcaatcgtccagaaagcagggatcaagagcaccgacgtgatcctcgagatcggtccaggt
accggtaacttgaccaagaagcttctagaagctggtaaagaagtcatcgccgtcgaactc
gattctcgtatggttctcgagcttcagcgacgtttccaaggcactccctattctaaccgc
ttgaaggtgatccaaggtgatgtgctaaagacagagcttccacggtttgacatatgtgtg
gctaacattccttatcagatatcatctcctctcactttcaagcttctcttccacccgacg
agcttcaggtgcgctgtgatcatgtaccagcgtgagttcgcgatgaggctcgttgctcag
cctggagacaatctctactgccgtctctcagtcaacactcagctgtatgctagagtctcc
cacctcctcaaagtcgggaaaaacaacttccgaccgcctccgaaggtggattcctctgtc
gttaggatcgaaccgaggaagccgcagcctcaggtgaacaagaaggagtgggatgggttc
ttgagggtctgttttattaggaagaacaagactctgggagcgattttcaggcagaagtct
gttgttttgatgctggagaagaacttcaagactcttcaggcggtgctagcttcgctgaat
ggtgtgactggagaggctgctgtgatggatgttggtgaccagagcatgggaatggaagat
gatgacaacgagatggaggatgatgatgaggatatggagatggacgaaggacagggagga
ggaggagagtttaaggagaaggttatgaatgtgttgaaggaaggtgggttcgaggagaag
aggtcttcaaagctatcacaacaagagtttttgtatcttctttccttattcaacaagtct
ggtattcacttctcttaa
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