Brassica napus (rape): 125577165
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Entry
125577165 CDS
T04128
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125577165
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bna01001
]
125577165
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
125577165
03036 Chromosome and associated proteins [BR:
bna03036
]
125577165
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
125577165
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125577165
Protein kinases [BR:
bna01001
]
Serine/threonine kinases: Other
TAF1 family
125577165
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125577165
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
125577165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
ubiquitin
TBP-binding
Rad60-SLD
Ubiquitin_5
zf-CCHC_6
DRHyd-ASK
Motif
Other DBs
NCBI-GeneID:
125577165
NCBI-ProteinID:
XP_048594092
LinkDB
All DBs
Position
A1:24393552..24403855
Genome browser
AA seq
1762 aa
AA seq
DB search
MAERNEGSSEDDEEYADRSRGLEFIFGNVDNSGDLDADYLNEDAKEHLSALASSLPDIML
MASSGCTTSDPAEQDYNEKAADAVDYGDIDEEYDGPEVQVVTEEDHLLPEREYFSSAAAS
GSLYSKASVFDDDDYDEEEEQEVEHMPFEETFDSEDSESVVLKEDNALEYEEEASILGNE
ERLDTNEKNATSLPTLYVEDGMVVLQFSEIFAIHKPPQKRAKRENRYITYRDRYKSMELV
EDDEGLLLKSHGRVDTHVKQADLIQLDVPLPIRGDLQLVKAGTFGSIIPESREFTKPGRD
SCTMGELLKQDLQDDKSSLCQSQSSMEVFPLDQQEWENRIIWENSPGVSGNSCESFESGI
ESESLLIQGTNSETEQESLNVVNSGEQAQAENNKHVSFFVSGLESLGSHTTSESTNKSRR
HPQLLRLESQWDEDHPSENDNTGGKNLKQLKRDTVGRFSRLGLQERDMGDDPWLDSIIWE
SDKELTRSKLIFDLQDEQMVFEIPDNGESKDLQLHAGSMILSRSSKPKDKRFQEGCGSNY
GFQFNISNDKFYMNGKSCQQLQANANQFGIHSLRVLHSASAIKLQTMKNKLSNKDIANFH
RPKALWYPHDNELAIKQQGKLPTQGSMQIVVKSLGGKGSRIHVGIEESVSSLKAKASRKL
DFKETEAVKIFYMGKELEDEKSLAEQNVHPNSLVHILRTKVHLLPWAQKLPGEHKSLRPP
GAFKKKSDLSTKDGHVFLMEYCEERPLMLSNAGMGANLCMYYQKLSPADQHGNLLRDKND
TSGNVMILEPGEKSPFLGEIQGGCSQSSIETNMYKAPVFPHKLQSTDYLLVRSSKGKLSL
RRIDKTFAVGQQEPRMEVMSPASKNLQTYLVNRMLVYVDREFKHRRRIPADELSFLFSSL
SDAVVKKTMRIHGIFLERDKNGHIFWYKKHRFDKIPHEIELKNLVAPEDVCSYESMLAGL
YRLKHLGITQFTLPASISTALAQLPDEAIALAAASHIERELQITPWNLSSNYVACTTQDR
ANIERLEITGVGDPSGRGLGFSYVRAAPKVPAAAGRMKKKEAACCGAPTVTGTDADLRRL
SREAAREVLRKFNVPDEKMAKQNRWHLIAMIRKLSSEQAASGVLKVDPTTIGKYARGQRM
SFLQLQQQAREKCQEIWDRQLLSLSACDDDESESENDMDSFVGDLENLLDAEEWEESNTS
KNDKFDGVNGFKMRRRPYQVVTDEDVEDEAAEYAELRRLLMKDDEKRNMNAEFVRKDSVS
AKKHIASRPDASFLVTKSSFSKNTTNVSVFKERKPVRDNFFCGACGQPGHMKTNKHCPKY
RSTTEPQPEGIYVKKSSGTPSSSDLSGQVKLEPIKSKKTAPKSPTKVSVDEAPKGDNPTS
KTGGLTLRFKCAIPAGGMLDKPGSETPRRSMEEPDRPLPSLMPAFIRERGESESHRPSVS
GQSFSNTERNQAASSRLTMSTTQPSLRMDKELVIQRPNEREQPQKKLVIKRSKVITDSLT
LSSQFESRKTMRMAEPEGFQSQQRFRLSENSLHRGQKEGRVWQEEREISTERNREARVRR
DYADMTKFEKASEIGSEREEKERQKKLQPEVIERYLEGYPRRRNDRKLLERVQKVRSQYV
SDFERNVAQYAPQPKRRKKGEVGLANILEVIVDTLRAKEVNVSYLFLKPVSKKEAPDYHD
VVQRPMDLSTIRDKVRRVEYRDREQFRNDVWQIKYNAHLYNDGRNPMIPPLADELLVKCD
GLLERYRDELTEAEKGIVNLID
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacgcaacgagggttcttcagaggacgatgaagagtatgcggacagaagcagg
ggactggagtttatctttggaaacgttgataactctggtgatttggatgctgattacctt
aatgaggacgccaaggaacatctttctgcattggcttcgtctcttccagacataatgctg
atggcaagttcaggatgtacaacaagtgatccagctgaacaagattacaacgaaaaagct
gcggatgctgttgattatggggatattgatgaagagtatgacgggcctgaggttcaagta
gttactgaggaagatcatctactgccagaaagagagtatttttcgtctgcagctgcctcg
ggtagtttatattccaaagcttctgtatttgatgatgacgattatgatgaggaagaagaa
caagaggtggagcacatgccatttgaagaaacttttgattctgaagatagtgaatcagtt
gtcttaaaggaagacaacgcgttggagtatgaagaggaggcttccatcttgggaaatgag
gaacgattggacacaaatgagaaaaatgcaacgtcactgcctaccctgtatgttgaagat
ggtatggtcgtcttacaattctctgagatatttgctattcataagccaccacagaaacga
gcaaaaagagaaaatagatatatcacttacagagatagatacaaatctatggagcttgtt
gaagatgatgaggggttacttcttaagagccatggtagggtcgacactcatgtgaaacaa
gctgatctgattcagctggatgttccgttaccaataagaggggatttacagctggtaaaa
gctggcacattcggaagcatcataccagaatcgagagaatttaccaagccaggacgggat
tcatgcaccatgggtgaactgttgaagcaggacttacaagacgataaatcatctctgtgc
cagtcacaatcatcaatggaagtttttcctcttgaccagcaagaatgggaaaatcgaatt
atttgggaaaattctcctggagttagtggtaattcttgtgaaagcttcgaatctggaatt
gagtcagaaagcctgcttattcaaggaacaaactcagagactgaacaagaaagcttaaac
gtggtgaattctggagagcaagctcaagctgaaaataataagcatgtatctttttttgtc
agtggcttggagtctcttggttcacacactactagtgagtccactaacaaaagtagacgt
catccgcaactccttaggttagaatctcagtgggatgaggatcatcctagtgaaaatgac
aatactggagggaagaatttaaagcagcttaaaagggacactgttggacgctttagcaga
cttggattgcaagagagggatatgggggatgacccatggttagatagcataatttgggag
tcagataaagagttgaccaggtctaaactaatatttgaccttcaagatgagcaaatggtc
tttgaaatcccggataacggggaaagcaaagatcttcaacttcatgctggatctatgatt
ctatcccggtcttcaaagcccaaggataaaagatttcaggaaggctgtggctcaaattat
gggttccagttcaatatttctaatgacaagttctatatgaatgggaaaagctgtcagcaa
ctgcaagcaaatgctaatcaattcggcatacacagtttgagagttcttcattcagcgtca
gcgattaaattacagacaatgaagaacaaattgagcaataaagacatagcaaattttcac
cggcccaaagctttatggtatccacatgacaatgagctagcgatcaagcagcaaggaaag
ttaccaacccaaggatccatgcaaattgtagtaaagagtctggggggtaaaggaagcagg
atacacgttggcatagaggaatctgtctcttctttaaaagccaaggcttctaggaagcta
gattttaaggaaactgaagcagtgaagattttttatatgggaaaggagcttgaggatgaa
aagtctcttgctgaacaaaatgttcatccaaattctttggtccatattttacgcaccaag
gtacatctgttgccatgggcacaaaagcttcctggcgaacataaatctttgagacctcct
ggggcattcaagaagaagtcagacctatctactaaagatggccatgttttcttaatggag
tattgtgaagagaggcccttgatgctcagcaatgcaggaatgggtgcaaatttgtgcatg
tattatcagaagttatccccagcggatcagcatggaaacctgctgcgcgataaaaatgac
acttcagggaatgtgatgattctagaacctggggagaaatctcctttccttggggaaata
cagggtggctgcagtcagtcatctattgaaacaaacatgtacaaagcacctgtttttcct
cataagttgcaatcaacggattatctgttggtccggtcttctaaaggaaagctctctcta
aggcgtattgacaagacatttgctgttggacaacaggaacctcgaatggaagtaatgtct
cctgcatcaaagaatctgcagacttatttggtgaacaggatgttggtctatgtggaccga
gaatttaagcatcgccgccgtattcctgcagatgagctgtctttcttattttctagctta
tccgatgcagtagtcaagaagaccatgagaattcatggtatttttcttgagagggataaa
aatggccatattttctggtacaagaaacataggtttgacaagattccacatgagattgag
ttgaaaaatcttgtggcaccagaggatgtgtgttcctatgagagtatgctagctgggctg
taccggctcaaacatttagggatcacccagtttacattgcctgccagcatatcaactgca
ttggctcagctcccagatgaagccattgctcttgccgctgcttcacatattgagagggag
ctgcagattactccgtggaatttgagtagtaactatgttgcttgtacaactcaggacaga
gcaaatatagagcgtttggaaattactggagttggcgatccctctggacgaggtctagga
ttcagctacgtccgagctgcgccaaaagtgccagctgcagctggtcgtatgaagaaaaag
gaagcagcgtgttgcggagccccaactgtaactggtacagatgctgatcttcgcagatta
agcagggaagcagctcgagaggttcttcgcaagttcaatgttcctgatgagaaaatggcc
aagcaaaatcgatggcacctgatagctatgatacgcaagctatcgagtgagcaggctgca
tctggtgtacttaaggttgatcctacgacaataggtaagtatgcccgtggccagagaatg
tctttcctacagttacaacagcaggcccgggaaaagtgtcaggagatttgggataggcaa
cttctgtccctttcagcttgtgatgacgatgagtctgagagtgaaaatgacatggactcc
tttgtcggagatctggaaaatctactcgatgctgaggagtgggaagaatctaatacgtct
aaaaatgacaagtttgatggagtcaacggattcaaaatgagacggcggccatatcaagtt
gtgacagacgaagatgttgaagatgaagctgctgaatatgccgagttacgccgattgctg
atgaaagatgacgaaaaaaggaatatgaatgctgaatttgtcagaaaggacagtgtcagt
gccaagaaacatattgcctcccgtcctgatgcatctttcttagttactaagagcagcttt
tccaaaaacacaacaaacgtcagtgtattcaaagaaagaaaaccagtgagagataacttc
ttctgtggagcctgtggtcagcctggacacatgaaaaccaataagcactgcccaaaatac
agatcaactacagaaccacagcccgaaggtatatatgtgaagaagtcttctgggacaccg
agttcttcggatctatcaggccaggtcaagctggaacctatcaaaagcaaaaagaccgcg
ccaaaaagtccaacaaaagtttctgtagatgaagctccgaagggagataatccaacttcc
aaaaccggaggtcttaccctgaggtttaaatgtgctatacccgctggagggatgttagat
aaacccggttctgaaactccaagacgctctatggaagaacctgatagacctttaccttca
ttgatgcctgcatttatcagagagagaggggagagcgagtctcacaggccttctgtttct
ggacaatcattttctaatacagagagaaatcaggctgcatcaagcaggcttactatgtca
accacgcagccatcattacgcatggataaagaacttgtgatacagcggccgaatgaaagg
gaacagccccagaagaaacttgttataaaacgttcgaaagtgataactgatagccttaca
ctgagttcacagtttgagtccaggaagacaatgagaatggcagaaccagaaggttttcag
agtcagcagagattcagattgtcagagaactcactacaccggggacaaaaagagggtaga
gtatggcaagaagaacgggagataagtacggaaaggaacagggaagcaagggtgagaagg
gattatgctgatatgactaaatttgaaaaagccagtgagatagggagtgaaagggaggaa
aaggaacggcaaaagaagctgcagccggaagtaatagagagatatctagaaggttatcct
cgtcgaagaaacgatagaaaattgttagaaagagttcagaaagtcagaagccagtatgtc
tctgactttgaaaggaacgtggcacagtacgcacctcaaccaaaacgacgcaaaaaggga
gaggttggcctagcaaacatcttggaagtcatagtggacacactaagagccaaagaagta
aacgtgtcgtacctcttcttgaaacctgtttcgaagaaggaggctccggactatcatgac
gttgtgcaacgccccatggatctctcgacaatcagggataaggtacggagggtagagtac
agagacagagagcagtttagaaatgatgtctggcagatcaagtacaatgctcatctttac
aacgatgggcgtaacccgatgataccgcccttggcagatgagctgctggtgaaatgtgat
ggcttgttggagagatatagagatgagttaacagaagcagagaaaggtatagtaaatctc
attgactga
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integrated database retrieval system
