Brenneria nigrifluens: EH206_15520
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Entry
EH206_15520 CDS
T06070
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
bng
Brenneria nigrifluens
Pathway
bng00020
Citrate cycle (TCA cycle)
bng00640
Propanoate metabolism
bng00660
C5-Branched dibasic acid metabolism
bng01100
Metabolic pathways
bng01110
Biosynthesis of secondary metabolites
bng01120
Microbial metabolism in diverse environments
bng01200
Carbon metabolism
Module
bng_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bng_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EH206_15520 (sucD)
00640 Propanoate metabolism
EH206_15520 (sucD)
00660 C5-Branched dibasic acid metabolism
EH206_15520 (sucD)
Enzymes [BR:
bng01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
EH206_15520 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QCR05467
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All DBs
Position
complement(3322390..3323262)
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AA seq
290 aa
AA seq
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MSILIDKNTKVICQGFTGSQGTFHSEQALAYGTLVVGGVTPGKGGSEHLGLPVFNTVREA
IDATGATASVIYVPAPFCKDSILEAIDAGIELIICITEGIPTLDMLSVKVKLEQSGVRMI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGLGQSSCVGIGG
DPIPGASFIDILKLFEQDPQTEAIVMIGEIGGTAEEEAAAYIKDYVTKPVISYIAGVTAP
KGKRMGHAGAIIAGGKGTADDKFAALAAAGVKTVRSLADIGEAVKAVLSR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgatcgataaaaacaccaaagtcatctgccagggttttaccggcagtcag
gggacgtttcactcggagcaagcgcttgcttacggcacgctggtggtcggcggcgtaacg
ccgggcaaaggcggcagcgaacatctggggctgccggtgttcaacaccgtgcgtgaagcc
atcgacgcgaccggcgccaccgcctcggttatctacgttccggcgccattctgcaaagat
tcgattctggaagccatcgacgccggcatcgaactgattatctgcattaccgaagggatc
ccgacgctggatatgctgagcgtaaaggtcaaactggagcagagcggcgtgcggatgatc
ggcccgaactgtccgggagtcattacgccgggcgaatgcaagatcggcatcatgccgggc
catatccatctgccgggcaaagtggggatcgtctcccgttccggcaccctgacttacgaa
gcggtaaaacagaccaccgacgccgggctgggacaatccagctgtgtggggatcggcggc
gatcctattcccggcgccagttttatcgatatcctgaagctgttcgagcaggatccgcag
acggaggcgattgtaatgatcggtgaaatcggcggaaccgccgaggaagaggccgcggcc
tatattaaggattacgtgaccaaaccggtgattagctacattgcgggggtaaccgctccc
aaaggaaaacgtatgggacatgccggggcgattatcgccggcggcaagggcaccgccgat
gataagtttgcggctttggcagccgccggggtgaaaacggtgcgcagtctggccgatatc
ggcgaggcggtcaaagcggtgctgtcccgctga
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