KEGG   Brettanomyces nanus: FOA43_001252
Entry
FOA43_001252      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
bnn  Brettanomyces nanus
Pathway
bnn03030  DNA replication
bnn03410  Base excision repair
bnn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FOA43_001252
   03410 Base excision repair
    FOA43_001252
   03420 Nucleotide excision repair
    FOA43_001252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bnn03032]
    FOA43_001252
   03400 DNA repair and recombination proteins [BR:bnn03400]
    FOA43_001252
Enzymes [BR:bnn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FOA43_001252
DNA replication proteins [BR:bnn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    FOA43_001252
DNA repair and recombination proteins [BR:bnn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      FOA43_001252
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 zf-DNA_Pol
Other DBs
NCBI-GeneID: 62194653
NCBI-ProteinID: XP_038777502
LinkDB
Position
1:complement(2673938..2680636)
AA seq 2232 aa
MMPALQNKGNLRNGGGARYVSRPGPYGYRKEKVETNYNNFNQKYTRSSEPMAGYADTKFE
AVKEIDRMDSLVGFDRYESGPEKTGWLVNFHTTTIPNEDIIQGCVGVDYYFLDEEGGSFK
VTMPYDPYFLVKCQEGAEGDVEEYLRKFLESTVKKVEQITKDDLRQPNHLLGIRRRLLKL
SFHNITDLLEARRVLRPIVERNKQSKESNDIYKSVNLNYNTLMKVDEDIGEDEDSSNANE
SHHTDPSELIEELREYDVPFHARVSIDKDIRVGKWYDIEADHDHVKFTERKDKIAFADPV
VLAYDIETTKAPLKFPDSAVDQVMMISYMIDGEGYLITNRDIIGEDIQDFEYTPRPEYPG
SFTIFNERNEKALLERFFEHVRETRPTVIATFNGDFFDWPFVEARASYHGIDMHNEIGFA
QDSEGEYKSTYCSHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYE
KPQTLAEYSVSDAVATYYLYYKYVHPFIFSLCSIIPLNPDEVLRKGTGTLCEILLTVQAY
THDIVLPNKHTDPLERFYEGHLIESETYVGGHVESLEAGVFRADLDSDFKIDPTAVDMLL
DDLECALKFAITEEGHQKLEDVTNFDEVYQDVKKQLLAFKEHTKIREPPVIYHVDVASMY
PNIMLSNRLQPDSMKSEEDCAACDFNRPGKKCDRRLSWAWRGEFYPADTSDYNMIKNAMQ
SETFSPRKPGLPNRSFDELSYSEQSTYLKKHVSDYSRKVYHRIKQSKIVEREAIICQREN
PFYVDTVRSFRDRRYEFKGLAKLWKKKLKQVNNTNKHALDEAKKMVVLYDSMQLAHKVIL
NSFYGYVMRKGSRWYSMEMAGVTCLTGATIIQMARALIERLGRPLELDTDGIWCALPKSF
PDTFDFKLKNGKVTSTTYPCSMLNYIVHKRFTNDQYQTMVDPTKKKYETHSENTIFFEAD
GPYRAMILPTSKEEGKGLKKRYAVFNFDGSLAELKGFELKRRGELQLIKNFQSDIFKLFL
DGDTLEACYATVADVANRWLDVLESRGKMLEDEDLIELICENRSMSKALVEYGKQKSCSI
STARRLGEFLGEEMVKDKGLACKYIVADRPIGSPVTERAIPTVIFSSDFAVKQKYLRRWL
KDPGLDDFDPRSIIDWSYYRERLASSIQKIITIPAALQGIKNPVPRIAHPDWMQKRIDTM
NDKLKQSSLTSFFGKAPPGSKPVMHDIEDLGKVSTDGKAPKIARVLSRKKRRHGEKENEE
DEDQHILRQPLPDPADDYIGFLKYEKVKWRLQAKEKERREKLFGRSFQISDQSAVSGYIK
RRAETYATTTWQIIQYRFDQSHPGDLKVFALIGGKIQTMILHIPKKIYIKFKSGNLPDGS
IEGCEVCKSAESLPTGRDNYNLFKLIMPESVFKNEMNKPDTILKSSAVEGIYEANISAVD
RAIMELGTCVKFDDKKMHLLAKSFEKGFDAESLKTFPADGYLNRFSMGILYLLHIISNGY
EIFTLFRSTEPSAYMYVLKASAHAQQLPPKMGAYYRDMFKAKKDLLDKYYGIIDYAPEIS
FETHYFTDISRLHRKLNARIGAINEHSASKYLLAIQSPYPAKLKKIFKSSWEMPTVMMNI
GEIKVSALSWHALIMKRIVNHYLSLSSWLSKLMELSRYSNIPLCNLKVDTMGYLIDIEYA
RRLSKAGIILWWSPSSAPDYGGSEKDMAVFESDESLQFPHFNHPEVYESVCLELEVKNLT
VNTILTSSWINEAEGVFISESGEKSNKDDSGVDTFADDSFSGPALAVLRGLVRRWWDDAI
KDNSEADSMVHAFISWYSNPFSFLYDSSLHYHIHNLTKKSFVQLLGEFKKTGARIAFADR
NKVILKTSKTVVENSYAYGQYLVSSVRSKPLFNLLELNIVRYWDLLIWMDKFNYAGSFCN
EIRGEDEQKLEYVSNWQVKNYLPIIMQGEFDDWVLLFLDAFAKDRERDGHSSQSAQGVVS
PRRTQITQILKQHKFDGRNGDGESMDMNEIENGVCEFFRSPLLKRIKTLISKQNEMLLDP
SMQQEFEFPKLAGSYLNSTNPTLELVKSLCHILSLSKRRNLEVRMLRRELLLLFEVKEFS
EEGTFKNPSTSLVIPQVICDYCDYTKDIDVCRDSEEVTFRCNSCHRAYNKLIIEEKLINE
LERAIAKYLSQDLKCSKCGRMKDREISLHCVCSGDWAATMNRTHILRRVRIFQNVADAYQ
FRLLRDVTEEFI
NT seq 6699 nt   +upstreamnt  +downstreamnt
atgatgccggctttacaaaataaaggaaaccttagaaatggtggcggagctagatacgtc
agtagaccgggtccttacggctacaggaaggagaaggttgaaactaactataataacttc
aatcaaaagtatacaagatcatcagaacctatggcaggatacgcagacacgaaatttgag
gcagtgaaggaaatcgatcgaatggattcccttgttggatttgatcgatacgagtctggc
cccgagaagactggatggttggtcaatttccacaccactacgatccctaatgaggacata
atacagggatgcgttggtgttgactactactttttagacgaagaaggaggttctttcaaa
gtcactatgccctatgatccttattttctggtgaaatgtcaggaaggtgctgagggtgat
gttgaagaatatttaaggaagttcttagagtctacagtaaagaaggtggagcaaattact
aaggatgatcttcggcagccaaaccatcttcttggcattcgcagaaggctactcaagttg
agtttccacaacattacggatttgctcgaggctcgaagggtgttgcgaccgattgttgaa
agaaacaagcaaagtaaagagagcaacgatatctacaaatcggttaacttaaactacaac
acattaatgaaagtggatgaagatatcggtgaagatgaagatagttcaaacgctaatgaa
tcgcatcatacggatccttctgaattgatcgaagagctcagggaatatgatgttccgttt
catgctcgtgtctccattgataaggatatccgagtgggtaaatggtacgatattgaagca
gatcatgatcatgttaaattcaccgaacgtaaagataagattgcatttgccgatccagtt
gttcttgcttacgatatcgagactacaaaggccccactcaaatttccggacagtgccgtt
gatcaagtgatgatgatctcctacatgatcgacggcgagggttatttaattaccaataga
gacattattggtgaggatatacaggattttgagtacactcctagacctgagtatccaggt
tcgttcaccatttttaatgaacgtaacgaaaaagccttgcttgagagattctttgagcat
gttagagagaccagaccaacagttattgccacattcaatggtgatttctttgattggcct
tttgttgaagcgagagcatcatatcatggtatagatatgcataatgagattggctttgct
caggatagcgagggtgaatataagtcgacttattgctctcacatggactgcttccgttgg
gtgaaaagagactcttatttacctcagggttcccagggtttgaaagccgttactacagca
aagttgggttacaatcctacagagttggaccccgagttgatgactccatatgcatacgaa
aagccacagacattggcagagtactctgtgtctgatgctgtcgctacctattatctttac
tacaaatacgtgcatccattcatcttctctctttgttctattattcctttgaatccagac
gaggtgttgcgtaaaggtactggtaccttgtgtgagatacttttaaccgttcaagcttat
acccatgacattgtccttcccaacaagcatactgaccctctagaaagattttatgaggga
cacttgatcgagtctgagacgtatgtgggtggccatgttgagtcacttgaagctggtgtg
ttccgtgctgatttagattcagattttaagatcgatccaactgccgtcgacatgctctta
gacgatttggaatgtgcactaaagtttgccattactgaggaaggccatcagaagctggag
gatgttaccaattttgacgaagtttaccaggatgtcaagaagcagctactggccttcaag
gagcacactaagattcgggaaccccctgtcatttatcatgtcgatgttgcttccatgtat
cccaacattatgctatcgaaccgtttgcaaccagattctatgaagtccgaagaagattgc
gctgcctgtgattttaatcgaccaggaaagaagtgcgacagacgattatcgtgggcatgg
agaggggagttctaccctgctgacaccagtgactataatatgattaagaatgcaatgcag
agcgaaacgttttccccacgaaagccaggattacccaacagatcatttgacgaactttct
tactcagagcagtctacatatttgaagaaacatgtttctgattattcgagaaaagtttat
catcgtatcaagcaatccaagattgttgaaagggaggctatcatttgtcagcgtgagaat
cctttctacgttgataccgttcgttcgttcagagatcgtcgatacgagttcaaagggttg
gccaaattatggaagaaaaagctcaaacaggtcaacaataccaacaagcatgctttggac
gaagccaagaagatggtagtgttgtacgattcaatgcaattagcacacaaggttatcttg
aattccttttatggttacgtcatgagaaaaggttccagatggtattctatggagatggca
ggtgtcacctgcctcactggtgccaccattattcagatggctagagcattgatcgagaga
ctaggccgtcctctagagttggataccgatggtatttggtgtgcattacctaaaagtttt
ccggatactttcgacttcaagctgaagaacggaaaagtcacttctaccacctatccatgt
tcgatgttaaactacattgttcataagaggtttaccaatgatcagtatcagacgatggtg
gaccccacaaagaagaagtacgaaactcactccgaaaacaccattttctttgaggcagat
ggcccctacagggccatgattttgcctacttcaaaagaggaaggcaaaggtttaaagaaa
agatatgctgtctttaactttgacggatctctagccgaattgaaaggtttcgagttgaaa
aggcgtggtgagttgcagttaattaagaatttccaatcagatatcttcaaacttttcctt
gatggtgatactcttgaagcttgttatgctactgttgctgatgtggcaaatcggtggttg
gatgttttggagagtagaggtaagatgctagaagacgaggatttgatcgagttgatttgt
gagaatagaagtatgtcgaaagcgttggtggagtacggcaaacagaagtcctgctccatt
agcacggctcgcagattgggtgaattcctaggtgaggaaatggtgaaggataaaggtttg
gcttgtaagtatattgttgctgatcgtccaattggatctccagttactgagagggccatt
cctactgttatcttctcctcagactttgcagtgaaacagaagtatttaaggcgttggcta
aaagatcctggcttggacgatttcgaccctagatctattatcgactggagttactaccgt
gaaagattggccagttccattcaaaagattatcactattcctgctgctttacaaggtatc
aaaaaccctgttccaagaattgcacatcctgactggatgcagaaaaggattgacacaatg
aatgataagttgaaacagtcctctttaactagtttctttggtaaggcacctcctggttcc
aaacccgtcatgcatgatatcgaagatttgggaaaagtttcgaccgatggaaaggcaccg
aaaatagctcgtgtactttctagaaagaaaagacgccacggtgagaaagagaacgaagaa
gatgaagatcagcacatactcaggcagcctctgccagatcctgcagatgactacattggt
ttcctcaagtacgagaaggtgaaatggaggctccaggcgaaggaaaaagagagaagagag
aagctttttggccgtagtttccagatatccgatcaaagtgccgtttccggatacattaag
cgtcgtgcagagacgtatgccaccacgacatggcaaattattcagtacagatttgaccaa
agtcaccctggtgaccttaaggtgtttgcactaattggcggtaagattcagactatgata
ttgcatatcccaaagaagatctatattaagttcaaatctgggaacctccccgacggaagc
attgaagggtgtgaggtgtgcaagtcagctgaatcgctccctactggcagagataattat
aacttattcaagctgattatgccagagtctgtgttcaagaatgaaatgaataaacctgat
actatactcaagagttccgcagtagaaggcatctatgaagcgaacatttccgcagttgat
agagcaattatggaattaggaacgtgtgtgaagttcgacgataagaagatgcaccttctg
gcaaaatcgtttgagaaaggatttgatgctgaaagtttaaagacattcccagcggacggc
tacctgaataggttctccatgggaatcttgtacttacttcacatcatctccaatggctat
gagatcttcactttgtttagatcgacagaaccctctgcctatatgtatgtgttaaaagct
tctgcccacgcgcaacagcttcctcctaaaatgggtgcatactatagagatatgttcaaa
gcaaagaaggatctgcttgacaaatattacggaattattgactatgctccagagatctca
tttgaaacacattatttcactgatatatcgaggcttcatcgcaagttgaacgctcgaatt
ggcgctatcaatgagcatagtgcatccaagtatttgcttgccattcaatcaccctatcca
gcaaagctcaagaagatcttcaaatcgtcttgggaaatgcctacggtgatgatgaatatt
ggcgagattaaagtaagtgcactttcctggcacgcattgataatgaagaggattgtgaac
cattatttatctctttccagctggctcagtaaactcatggagttgtcacgttacagcaat
attccactctgcaacctgaaagtcgatacgatgggttacctcatcgacattgaatatgct
aggcgtcttagcaaggctggcattatcttatggtggtctcctagttcagcgccggactac
ggtgggtcagagaaggatatggccgtttttgagtctgacgaatcgcttcaatttccacat
ttcaatcatcctgaagtatatgagtctgtctgcttggaacttgaggtaaaaaatttgact
gtcaatacgattctaacttcttcttggatcaatgaagctgaaggtgtgttcatttctgaa
tcaggagaaaaaagtaacaaggatgattccggtgtggatacttttgcagatgattcgttc
agtggccctgctttagctgttctaagaggattggtgcggcgttggtgggatgatgctatc
aaggacaattccgaggctgattctatggttcacgctttcatcagttggtacagtaatcct
ttttccttcttatacgattcgtcattgcattaccacattcacaacttgaccaagaagtct
ttcgtgcagttgcttggcgagtttaaaaagacaggtgcccgcatcgcttttgcagacaga
aacaaagttattttgaagacctcaaagaccgttgtagagaattcttatgcatacggccaa
tatctagtgtcgagtgtcagatcgaagcctctattcaacttacttgaattgaatattgtc
agatactgggatttgttaatatggatggataaattcaattatgcagggagcttctgtaat
gagatcaggggagaggatgaacagaaacttgagtatgtgtcaaattggcaggttaagaac
tatttaccgattatcatgcaaggagagttcgacgattgggtgcttttgtttcttgatgca
tttgccaaggaccgggaaagggatggtcactccagtcagagcgctcagggggtcgtttca
ccaaggagaacacagatcacacagatcctgaagcagcacaaattcgacggcaggaatggc
gatggagaaagtatggacatgaatgagatcgaaaatggcgtgtgtgaattcttccgtagc
ccattgttgaagcgtattaagacgttgataagcaagcaaaatgaaatgctattagacccc
tcgatgcagcaggagtttgagttccccaagcttgccggttcttacttgaattcaacgaat
ccaacattagaattggtcaagagtttgtgccatattctcagcttgtcaaaaaggagaaat
cttgaagttcgtatgcttcgtcgtgagttacttttgctctttgaggtgaaagagttcagt
gaagaaggtactttcaagaatccgtccacgtccctcgtaattcctcaggttatctgtgat
tactgcgattataccaaggatatagacgtttgcagggactccgaggaagtgacattccgg
tgcaattcatgccatagggcgtacaacaagttgatcatcgaggaaaagttgataaatgag
ttggagagggccatcgccaaatatctcagtcaggacttgaagtgcagcaagtgtggaaga
atgaaggaccgagagatcagccttcactgtgtatgttcaggtgactgggcggctacaatg
aacagaacgcacatcttacgtagagttcgaattttccagaatgtcgctgatgcctatcaa
ttcagactgcttagagatgtaacggaagaatttatatga

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