KEGG   Bacillus nitratireducens: GSN03_25595
Entry
GSN03_25595       CDS       T07605                                 
Name
(GenBank) DNA-directed RNA polymerase subunit delta
  KO
K03048  DNA-directed RNA polymerase subunit delta
Organism
bnt  Bacillus nitratireducens
Pathway
bnt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bnt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GSN03_25595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bnt03021]
    GSN03_25595
   03400 DNA repair and recombination proteins [BR:bnt03400]
    GSN03_25595
Transcription machinery [BR:bnt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GSN03_25595
DNA repair and recombination proteins [BR:bnt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GSN03_25595
SSDB
Motif
Pfam: HARE-HTH DUF4777 ColG_sub PPP4R2 2Fe-2S_thioredx HTH_Crp_2 Pox_EPC_I2-L1
Other DBs
NCBI-ProteinID: QUG86656
LinkDB
Position
complement(4992519..4993061)
AA seq 180 aa
MNFKQYSPEELKECSMIEVVHSVLGDKRQATTFNELVQEIAQVLGLSQEQVNAKLAQFYT
DLNIDGRFINLGENRWGLRSWYPYEQIDEEILPQPKPKKKRKVEEDGFDDYIEEDEDEFG
DAEGNADEEDDVEDLDKVLEEEDADDEDDDLDDLEEDDEDFAEEELEYDEAEAEEEEEEL
NT seq 543 nt   +upstreamnt  +downstreamnt
gtgaattttaagcaatattcaccagaagagctaaaagaatgttcaatgattgaagttgta
catagcgttttaggggataaaagacaagcaacgacattcaacgagttggttcaagaaatc
gctcaagtgctgggactatctcaagagcaagttaatgcgaaactcgcacaattttataca
gatttaaacatcgatggacgtttcattaatttaggagaaaatcgttgggggctacgcagc
tggtacccatatgagcaaattgatgaagaaatcttacctcagccaaaaccgaagaagaaa
cgtaaagttgaagaggacggttttgacgactacatcgaagaagatgaagacgaattcggc
gatgcagaaggaaatgcagacgaagaagacgatgtagaagatttggacaaggttcttgaa
gaagaagacgcagatgacgaagatgatgatcttgatgatttagaagaagatgatgaagac
ttcgcagaagaagaacttgagtacgatgaagctgaagctgaagaagaagaggaagagctg
tag

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