Brassica oleracea (wild cabbage): 106296590
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Entry
106296590 CDS
T04124
Name
(RefSeq) beta-galactosidase 17 isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00052
Galactose metabolism
boe00511
Other glycan degradation
boe00531
Glycosaminoglycan degradation
boe00600
Sphingolipid metabolism
boe00604
Glycosphingolipid biosynthesis - ganglio series
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
106296590
09103 Lipid metabolism
00600 Sphingolipid metabolism
106296590
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
106296590
00604 Glycosphingolipid biosynthesis - ganglio series
106296590
00511 Other glycan degradation
106296590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106296590
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
106296590
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106296590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
106296590
NCBI-ProteinID:
XP_013588209
LinkDB
All DBs
Position
C6:28043831..28048963
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AA seq
705 aa
AA seq
DB search
MLDQAYFCRRGTMAKISKPSTGGHHLAFVLLLVLVAVGICVPVFALLPSLTSHQSLPPAL
SRDEKMMSRIFYIKDDKFWKDENPFQIIGGDLHYFRVLPEYWEDRLMRAKALGLNTIQTY
VPWNLHEPKPGKMVFEGIADLVSFIKLCQKLDLLVMLRAGPYICGEWDLGGFPAWLLAVK
PPLKLRTADPAYLELVERWWNVLLRKVFPLLYSNGGPVIMVQIENEYGSYGNDKAYLRNL
VTMARGHLGNDIILYTTDGGTRETLEKGNVPLYNVYSAVDFSTGDDPWPIFELQRKFNAP
GRSPPLSSEFYTGWLTHWGEKIAKTDAEFTAASLEKILSSNGSAVLYMVHGGTNFGFYSG
ANTGSEEFDYKPDLTSYDYDAPIKESGEIDNPKFKALRRVIKKYSAAPHTTTPYNTKRKA
YGPIKMQRTISLFDLMAMTDPVDVITSTNPISMESAGHLFGFLVYESSYISKKSGNILRI
PKVHDRAQVFVSCLSQDVDGGVLRYIGTTERWNNQPVSIPTTECTSNTSLFILVENMGRV
NYGPYIFDEKGILSPVYLDGEILHGWKMIPIPFHNVNQMPHFSFKMQHTKKSSENLELTN
DVGQKEPALFAGEFSINSVEEIKDTYLSFNGWGKGVAFVNKFNIGRYWPSVGPQCNLYVP
APLLKPGRNSVVIFELESPHVDLLLRSVDQEDFTCGSNYSKVNQL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcaagcctacttttgtagaagagggacgatggcgaagataagcaagccatca
acaggaggacatcatttggctttcgtgttgcttctggttcttgtggctgtcggaatctgt
gttcctgtcttcgctcttcttccgtcgctgacctctcatcagtctctgcctcctgcgcta
agtcgagacgagaagatgatgtctcggatcttttatataaaagacgacaagttctggaaa
gatgagaatcctttccagatcattggtggtgatttgcactacttccgagttcttcctgag
tactgggaagataggcttatgagagccaaggctttaggtctgaatactatacaaacgtat
gttccttggaatctgcacgaaccaaagcctgggaagatggtctttgagggcattgctgat
cttgtgtcctttattaagctgtgtcagaaactagatttgctggttatgctccgtgctgga
ccttatatctgtggagaatgggatttgggcggttttcctgcttggttgcttgctgtgaaa
ccacctctcaaactaaggacagcagatcctgcataccttgagttggtggaaagatggtgg
aatgtcttattgcggaaggtatttcctctgctttacagcaacggtggtcctgttataatg
gtccagattgaaaatgaatatgggtcatatggaaatgacaaagcttatcttcgtaatcta
gttactatggctaggggacacctggggaatgacattattctgtatacaaccgatggaggt
acaagagaaacacttgagaaaggaaatgtccccttatataatgtctactcagctgttgac
ttcagtacgggtgatgacccttggcctatatttgaattgcaaaggaagttcaatgctcca
ggaagatcacctccactttcttcggagttctatactggttggcttacgcattggggcgag
aagattgcaaaaacagatgccgaatttacagcagcttcacttgaaaagatattatccagc
aatggttcagctgtgctatatatggtgcatggaggaacaaactttggtttctacagtgga
gcaaatactggctctgaagaattcgactacaaaccagatctgacttcctatgattatgat
gctcccattaaggagtctggtgagatagataatccaaaattcaaagctctccggagagtg
attaagaagtacagtgctgcacctcacaccactaccccctacaataccaaacggaaagcg
tatggcccaatcaagatgcagaggacaatatctctgtttgatttgatggctatgacagat
cctgtagatgtgataacttccaccaacccaatttctatggaatctgctggacatttgttc
ggatttcttgtatatgaatcgtcatacatttccaaaaagagtgggaatatactaagaata
cccaaggtgcatgacagagctcaagtgtttgtttcctgcctttcccaagatgttgatggg
ggagtactgagatacattggtacaactgagagatggaacaaccaacctgtttctattcca
actactgagtgtacctctaacactagcttatttattctggttgaaaacatgggacgtgta
aattacgggccatatatctttgatgagaagggtattctgtctccggtttatctagatggt
gaaattctccatggatggaagatgataccaattcctttccataacgtgaatcaaatgcca
catttcagtttcaagatgcaacataccaaaaagagtagtgagaaccttgagcttaccaat
gacgtgggtcaaaaggaaccagctctgtttgctggtgagttctctatcaacagtgtagaa
gaaatcaaagacacttatctatcattcaacggttggggcaaaggagttgcgtttgtcaat
aaattcaacatcggaagatattggccatctgttggaccacaatgcaacctctacgttcct
gcgccactccttaagcctggcagaaactctgtggtgatctttgagttggaatctccacat
gtcgaccttttgcttcggtcagtggatcaggaagacttcacatgcggttcaaattattcc
aaagtcaatcagttgtag
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