Brassica oleracea (wild cabbage): 106305196
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Entry
106305196 CDS
T04124
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Module
boe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106305196
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
106305196
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106305196
NCBI-ProteinID:
XP_013597021
UniProt:
A0A0D3DC55
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Position
C7:35323379..35325725
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AA seq
424 aa
AA seq
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MTNYNFIIVVKFLVTFLIFVSPNKILAFYDRFYGYAEEPMGPSFPYEVFDVSKFGASPNA
DSDNTLAFGKTWWAACNHQGRSKFYVPEGRFLVGAIQFKGPCRTESTMEVEITGDLIAPT
GIKDFPSNQWIGFSQLNDIFLYGSTNLDGRGDVEAWKQKSCEDSKCDKLITSLSLDNVSN
SIIENISLSNAKGFHLRLHSASNVTVHNVSISSPWDSPNTDGIHVHSSSFINITNSTIGA
GDDCVSISTGSLDVLVSGTHCGPGHGFSIGSLGKVKNEEEVRRIKFQNCTVNGADNGVRI
KTWPTSPPSQASDITFEDILMINVSNPIFIDQEYCPSNSCNTTSASMVKLSNIEFKNIRG
TYRSDFGVNLKCSSVVACENIMLIDVNLNGTNSTYKTPKEKWEQEKFSTKGSLNGLAVFN
STFN
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgactaactataattttatcattgtcgttaagttcttggttaccttcttaatctttgtg
tctccaaacaaaatattagctttttatgatagattctatggatatgctgaagaaccaatg
ggtccatcattcccatatgaagtttttgatgtctccaagttcggagccagccctaacgcc
gactcagacaacactcttgcatttgggaagacatggtgggcagcttgcaaccaccaagga
agatcaaagttttacgtcccggaaggtagattcttagtgggtgcgatccagttcaagggc
ccttgtcgcactgaatcaaccatggaagttgagattacaggagatctaattgctccaacg
ggcattaaggattttccttcgaatcaatggattggttttagtcaactaaacgatatcttc
ttgtacggaagtactaacttagatggtagaggcgacgtcgaagcctggaaacaaaaaagt
tgcgaagattccaaatgtgacaaactcataacgtctctgagcttggacaacgtgtcaaat
tcgataatcgaaaacatttcgttatcaaatgcgaaagggtttcatttgcggttacactct
gctagcaacgttacggtccacaacgttagtatcagctccccatgggacagtcctaacacc
gatgggatccacgttcatagctcctctttcatcaacatcaccaactcaaccattggagcc
ggagacgactgcgtctccatctcaactgggagtcttgatgtgctcgtctccggcacacat
tgtggtccaggccatggattcagtattgggagcttggggaaggttaagaacgaggaagaa
gtgagaagaattaagtttcaaaactgcaccgttaacggagctgataacggagttaggatt
aagacatggcctacatcaccgccgagccaagctagtgatataacgttcgaggacatttta
atgattaatgtctctaatcccattttcattgatcaagagtattgcccttctaatagctgc
aacaccacctctgcatcgatggtgaaactgagcaacatagagttcaagaacatacgagga
acgtacagaagtgatttcggggtgaatctgaagtgcagctctgtcgtggcctgtgagaac
ataatgcttatcgacgtcaatctcaatggtactaactcaacttataagacgccgaaggag
aagtgggagcaagagaaatttagtacgaagggtagccttaatggcttagcggtttttaac
tcgacttttaactag
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