Brassica oleracea (wild cabbage): 106305803
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Entry
106305803 CDS
T04124
Name
(RefSeq) probable DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106305803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106305803
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106305803
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106305803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
106305803
NCBI-ProteinID:
XP_013597647
UniProt:
A0A0D3D5W1
LinkDB
All DBs
Position
C7:16384056..16391860
Genome browser
AA seq
1188 aa
AA seq
DB search
MVIKGKDTVPNTEDFKELRNLVTHHIESFDYMTEKGLDVMFTRINAVNVYDPSTENKWKI
SLENPKVFSPQKESLSSNSRKESLYPFECRQAKVSYMGALMADVCFQYDNGLGSGLGAVV
REKFEFGELPIMLMSNRCHLQGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRN
HPTGMIRNSFTGKREGYSDKAVAIRCVRDDQSAVTIKVYYNRNGSARVGFWIGGREFLLP
VGLVLKALTETNDEEIYESLNRCYNEHYGRGDGSIGTQLVRERAKIILDEVRDLGLFTRE
QCRKYLGEHFKSDIDGLEKESYPVVAEAVLKNYIFVHLDNDDDKFNLLIFIIQKLFSLVD
QTSLPDNPDSLQNQEILVPGHLITIYLKEKLEEWLRKCKSTIEEEMRNVKSKFDFENHAD
IKKLMNRNQPRSIGTSIESLLKSGCMTTRSSLDLQQKVGYTVQAERLNFLRFLSFFRAVH
RGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRISSQFDSNGNIRDF
RKIRRSVVDVLVGIGMVTSLPKLVRAGPPKVIHVLLDGQVVGSLSSNLVPEVVAYLRRLK
VEAPSIIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNTSIPSNNLELIGPFEQVF
MEISCPDGGNGGRNNSSLATHEEIDPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMA
YSTQALQFRADQKIYHLQTPQSPVVRTKTYTAYNIDENPTGTNAIVAVLAHTGFDMEDAM
ILNKSSVERGMCHGQIYQTEAIDLSDQKSRSGSGNKRFRRNNAVKSAHPCVDADGLPYVG
QKIYPNETYCSIYDGVTNDFKPMKRKGTDPVIVDFVSLDMKSKNHPQKANIRFRHARNPI
IGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKG
GSLRGEFVDATPFRDAVKKTNGEEESKSSLLVDDLGSMLKQKGFNHYGTETLYSGYLGVE
LKCEIFMGPVYYQRLRHMVSDKFQVRSTGMVDQLTRQPIKGRRRGGGIRFGEMERDSLLA
HGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSVLNVQQKKLIREIGNLPPGRTPKKVTC
ASCKTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSNSGEGSDSEGV
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggttatcaaagggaaagacacggttcccaacaccgaagacttcaaggagcttcgcaat
ctcgtcacgcaccacatagagtctttcgattacatgacagagaaaggtctcgatgttatg
ttcactcgaatcaacgccgtcaatgtttacgacccatccaccgagaacaagtggaaaatt
agcttagaaaatccgaaagtgttctctcctcagaaggagagtttgagttcaaattcaagg
aaagagtctttgtatccctttgagtgtcggcaggcgaaggtatcgtacatgggagcgctt
atggctgatgtttgctttcagtatgacaatggactcggaagcggccttggagccgtcgtc
agagagaagtttgagtttggtgaattacctattatgctgatgtcaaaccgttgccactta
cagggtgctgattgccgaaagcttctaaagtgtaaagagtcaacttctgaaatgggaggg
tactttattttgaatgggattgagagagtgttccgatgtgttattgcaccaaagcggaac
catccgacgggtatgatccggaactcattcactggaaaacgggaaggatacagtgacaaa
gcagttgccattaggtgtgttagagacgaccagtccgctgtcactattaaggtgtactat
aatcgcaatggaagtgccagagttggattctggataggtggaagggaatttttgcttcct
gtcggccttgttctcaaggctctcactgaaaccaacgatgaggaaatatacgaaagcctg
aaccgttgttacaatgagcattacggaagaggcgatggatctattggaacccaactcgta
cgtgagcgagccaaaatcattcttgatgaagtgagagacttgggtctttttacccgggaa
cagtgccgcaagtatctaggagagcattttaaatctgatattgatgggctggaaaaagaa
agctatcctgttgttgctgaagccgtgctcaagaattatatttttgttcaccttgacaac
gatgacgacaagttcaatttgctcatcttcataattcaaaagctcttttctctggtggat
cagacttctttacctgataatccggattctctgcaaaatcaagaaattttagtcccgggt
caccttataacaatttacctcaaggaaaaacttgaagagtggctgcggaaatgcaaaagt
actattgaagaggagatgcgtaatgttaagagcaaatttgactttgaaaatcatgctgat
atcaagaagcttatgaacagaaatcaacccaggagtattggcacatcaattgagtctttg
ttgaaatcaggatgtatgactacaaggtctagtttggatttacagcagaaagtaggttac
actgttcaggcagagaggttgaactttctccgtttcctttcatttttccgggcggttcat
cgaggtgcttcctttgctggacttcggacaacaactgtgaggaagctgcttcctgaatct
tggggttttctttgccctgttcacactcctgatggggagccctgtggattactgaatcat
atgacacgtacttgccgaatctcttctcaattcgattccaatggaaacatcagagacttt
cggaagataagaaggtcggtcgttgatgttcttgttgggattgggatggtaacttcattg
ccaaaacttgtacgagctggaccaccaaaagtgattcatgttcttttagatggccaagtt
gttggatctctatcttctaacttagtccctgaggttgtcgcttatttgcggagactgaaa
gtggaggctccttcaatcattcctgaagacctcgaagtcggatatgtaccaacaagcatg
ggtggatcttatcctggattgtatttggcatcatgtcccgcaagattcatcaggcctgtt
aaaaacacatcgattccatccaacaatcttgaactgattggaccatttgagcaggttttc
atggaaataagctgtcctgatggtggaaatggaggaaggaataactcatcccttgcaact
catgaggaaattgatccaactgggatgataagtgtggttgctaatcttacaccttggtct
gatcataaccaaagtccccgtaacatgtatcagtgtcagatggcgaaacaaaccatggct
tactctactcaagcactccaattccgtgctgaccagaagatttaccacttgcagactcct
caatcccctgtggtgcgcacgaaaacgtacactgcatacaacattgatgagaatccaaca
gggactaatgcaatagttgctgtcctggctcatactggatttgatatggaagatgctatg
attttgaacaaatcatctgtggagcgggggatgtgtcatgggcaaatataccagacagaa
gctattgatttgtcagatcagaaaagccgatcgggtagtggtaataaaaggtttaggagg
aataatgctgtcaaatccgctcatccttgtgttgatgctgatggattaccatatgttgga
cagaaaatatatccaaacgagacgtattgtagtatctatgatggggtaaccaacgatttt
aagcccatgaagcgaaaaggaacagaccctgtcatcgttgactttgtttctcttgacatg
aagagcaagaaccatcctcagaaggcaaacattcgatttaggcatgccaggaatcccata
atcggtgacaaattcagtagtagacacggtcaaaagggtgtttgctcgcagctttggcct
gatattgatatgccgttcaatggagtgactggaatgcgtccggatctcatcattaaccct
catgctttcccatcaagaatgacaattgctatgcttttggaatctattgctgctaaggga
ggtagtctgcgtggggagtttgtagatgcaacaccgttccgtgatgcagtaaagaaaaca
aacggagaagaagagagcaaatccagtttacttgttgatgatcttggttccatgttgaag
caaaagggattcaatcactatgggacagagacattatacagtggttatttaggagtagag
ctcaagtgtgagatatttatggggcctgtttactaccaaaggctgcgtcacatggtctca
gacaagttccaggttagatctacaggaatggttgatcagctaactcgtcagccaatcaaa
ggaaggagacgaggtggagggattcgatttggtgaaatggaaagagactcattacttgct
catggagcttcctatctattacacgacaggctccacacctcttcagatcatcacattgcg
gatgtgtgttccctgtgtggaagcttgctgacttcttcggttttgaacgttcaacagaag
aagctgattcgagagattggaaatttaccacctggtaggactccaaagaaggttacttgc
gcttcttgcaagacaagcaaagggatggagactgtcgcaatgccgtacgtgttcaggtac
ttggctgcagaattggcgtcaatgaatattaagatgactcttcagttaagcaacagtggt
gaaggaagcgacagtgaaggagtctag
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