Brassica oleracea (wild cabbage): 106325330
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Entry
106325330 CDS
T04124
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Module
boe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106325330
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
106325330
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Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
106325330
NCBI-ProteinID:
XP_013618828
UniProt:
A0A0D3AWS6
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Position
C2:complement(47005424..47007219)
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AA seq
397 aa
AA seq
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MGVHFGVSTFFVFCLLALSANAREFRITARPGSDITGELSKLFKEACQCVDKSTVLIPKG
EFKLGEIEMMGPCKAPIIFVLQGTVRADGNVNGKDFWVAFRRITNFRLNGGGIFDGEGNA
SWRANNCHKTSLTQCKRLPISIRFDYITDGKVRDITSLDAKNFHINVIGAKNLTFEDIRI
VAPDESPNTDGIHVGRSDGIKIINTNIKTGDDCISVGDGMKNLLVERVTCGPGHGISIGS
LGLYGHEEDVTGVKVVNCTLRNTDNGVRIKTWPSAACSTTASGIHFENIILQNVSNPILI
DQEYCPWNRCNKNKPSSIKLVDIKFKNIKGSSGNKDAVKLLCSKGFPCKNVEIGDIDITY
NGKDGPATFQCSNVSPKLVGKQCPKACSSPVTKQPGH
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtacattttggagtatccacattctttgttttttgtttgttagctttatcagca
aacgctagagaattcagaatcactgctcgtccaggttctgatatcaccggcgaattgtcg
aaactattcaaggaggcatgtcagtgcgtggacaagagcaccgttttgatcccaaaaggt
gaattcaagcttggggaaatagagatgatgggtccatgcaaagctcctataatatttgtt
cttcaaggcactgtgagagctgatgggaacgttaacgggaaggacttttgggtcgctttc
cgcaggattactaactttagattgaacggaggtggtatctttgacggtgaaggtaacgct
tcatggagggctaataactgccacaagacgtcattaactcagtgcaaaagactccctatc
agcatacggtttgattacataactgacggtaaggtaagagacataacctcgttagatgca
aagaacttccacattaacgtgatcggggcaaagaacctgacattcgaagacatcaggatc
gtagcccctgatgagagtcccaacaccgatggaatccacgtgggaaggagtgacggaatc
aagatcatcaacaccaacatcaaaaccggagatgactgtatctctgttggggacgggatg
aaaaaccttcttgtggaaagagttacatgcggtccgggacacggaatcagtattggaagc
ctcggattatacgggcacgaggaagacgtcactggcgtcaaggtcgtgaactgcaccctc
aggaatactgacaatggtgtgaggatcaagacatggccgtccgcagcttgctccacgacc
gcctctggtatccatttcgagaatattattctccagaacgttagcaaccctatcctcatc
gaccaagagtactgcccctggaaccgatgcaacaagaataaaccatcatctatcaagctg
gtggacataaagttcaagaatatcaaaggatcatcagggaacaaagacgcagttaagcta
ttgtgcagcaagggatttccgtgtaagaacgtggagatcggcgacattgatattacatat
aatggaaaagacggtccagcaacgttccagtgctccaacgtatctccgaagttggtgggg
aaacagtgtcctaaagcatgtagcagcccagtgacgaagcaaccaggccactag
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