Brassica oleracea (wild cabbage): 106327100
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Entry
106327100 CDS
T04124
Name
(RefSeq) DNA-directed RNA polymerase III subunit rpc1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106327100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106327100
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106327100
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
106327100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
106327100
NCBI-ProteinID:
XP_013620591
UniProt:
A0A0D3AKT9
LinkDB
All DBs
Position
C2:complement(7433758..7442343)
Genome browser
AA seq
1370 aa
AA seq
DB search
METKTEIEFTKEPYVEDVGPLKIQSINFSMLSDIEVMKAAEVQVWKNMYYESNFKPIEGG
LLDPRMGPPNKRSTCATCHGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKSCSS
MLIEEKMYEDHLKKMRNPRTEPLRKTELAKAVVKKCSLMAGQRVITCKKCGYLNGMVKKV
AAQLGIGISHDRSKIHGGEIDEFKSAISHTKESAGGINPLTYVLDPNVVLRLFKGMSDKD
CELLYIAHRPENLIITCMLVPPLSIRPSVMIGGTQSNENDITERLKKIIQDNASLHKILS
QPTTSPKNMQVWDTVQSEVAQYINSEVRGVQIMPNTKPLAGLLQRLKGKGGRFRANLSGK
RVEFTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIDKLRQRVRNGPNKYPGAR
NVRYPDGSSRTLVGDYRKRIADELTYGCIVDRHLEDGDAILFNRQPSLHRMSIMCHRARI
MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEMLVA
STQDFLTSAYLITRKDTFYDRAAFSLICSYMGDAMDSIDLPTPTIFKPIELWTGKQVFNV
LLRPNASVRVYVTLNVKEKNFRKGEHYDETMCINDGWVYFRNSELISGQLGKATLGNGSK
DGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGKKLKEDRKDIVERR
YRDCDELLKNYEKGDLDAAKTLEANLTGFLNKIREETGKLCMDGLHWRNSPLIMSQCGSK
GSPINISQMVTCVGQQTVNGSRAPDGFIDRSLPHFPRMSRTPEAKGFVANSFYDGLSATE
FFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDG
MDPALMEGKNGTPLNFDRLFLKIQATCPPRSHHNYLSSDELLQKFEEELVRQDTSRVCTD
AFVKSLREFVCLLGVKSASPSQIFSKGSGVTDKQLEVFVKICVSRYRGKTIEPGTAIGPI
GAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRINEIINATKTISTPVISAELENPLVEA
SARMAKGRIEKTTLGQVAESIEVLMTSTSASVRITLDKKIIEEAFLSITPWSVKNAILKT
RIKLQDENIRVLDTGLDIIPKGDQNGTHFTLHNLKNVLPNVIVNGIKTVERVVIAEDTDK
KKEIGGKKRLKLFVEGTNLLDVMGTPGIDGRTTTSNNIVEVSKTLGIEAARTTIIDEIGS
VMGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDHLFSAAI
SGKVDNIEGVTECVIMGIPMKLGTGILKVLQKTKTEDLPKLNYGADPIIS
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaagacggagatcgaattcaccaaggagccctacgtcgaagacgttggtcct
ctcaaaatacaaagcataaacttctcaatgctctctgatattgaagtcatgaaagctgct
gaggttcaggtctggaagaatatgtactacgagagcaattttaagcctattgaaggcggc
ttgttggatcctcgaatgggtcctcctaacaaaaggtctacatgcgcaacctgtcatggc
aacttccaaaactgtcctggacactatggctatctgaagcttgaccttccggtttataac
gttggattcttcaattttatccttgacattttgaagtgcatctgtaagagctgttcaagc
atgcttattgaagagaagatgtatgaagatcacttgaagaagatgcggaatccaagaacg
gagccattgaggaagactgaattggccaaagcggttgtcaagaagtgcagtctgatggct
ggccagagagttattacttgcaaaaaatgtggatacctcaatggcatggtaaagaaggtc
gctgcgcagttgggtataggcatcagtcatgaccgatctaaaatccatggtggagagatt
gatgaatttaaatctgcaatatcccacacaaaagagtctgctggaggaataaatcctctc
acctatgttcttgatcctaacgtggtgcttagactttttaaaggaatgagtgacaaggac
tgtgaacttctgtatattgctcatagacctgagaatcttatcataacgtgcatgctcgtg
ccacctttatcaatccgaccgtctgttatgattggtggtacacaaagtaatgaaaacgac
ataacagagagattaaagaaaatcattcaagacaatgcttctcttcataagattttaagc
caacctaccacatcgcccaaaaacatgcaagtatgggatacagttcaaagcgaggttgca
caatacattaatagtgaagtccgaggtgtccagatcatgccaaacaccaagccactggct
ggactccttcagcgtctcaagggaaaagggggacgtttccgtgcaaacttgtcagggaaa
cgtgtcgagttcactggtagaactgttatttcacctgatcccaatttgaaaattacagag
gtagggattcctattcttatggcccggatcttaacttttcctgaatgtgtgtcccgtcat
aatattgataagttgaggcaacgcgtccgtaatggccctaataaataccctggtgccaga
aatgtcagatatccagatggttcttcaaggactttggtgggtgattatcggaagcgtatt
gctgatgaattgacctatggatgcatagttgaccgtcatttggaagacggggatgctatt
cttttcaacagacaaccgagtctgcatcggatgtctatcatgtgtcacagggcaagaata
atgccttggagaacattgaggttcaacgaatcggtttgtaacccatataatgctgatttt
gacggtgatgagatgaacatgcacgtaccacaaacagaggaggctcggacagaggctatt
acattgatgggggtacaaaacaatttatgcaccccaaaaaatggagaaatgttagtagca
tcaacacaggattttttaacatctgcctatttgataacgagaaaggacacattctatgac
cgtgcagccttttcacttatatgttcttacatgggagatgccatggattccatagatttg
cccacgcccacaatctttaagccaatagagctttggactggtaaacaggtttttaatgtt
ttgctgcgtccaaatgcgagtgtcagagtctacgtaactcttaatgtgaaagagaagaac
ttcaggaagggagaacattatgatgaaacaatgtgcataaatgatggatgggtttatttt
cggaacagtgagctaatatcaggacaactggggaaggctacgttaggaaacggaagcaag
gatggattatattcaattcttcttcgagattacaactcccatgctgctgcagtctgcatg
aatcgtctagcaaagttgagtgctcgatggattggaatccatggcttctccattgggatc
gatgacgttcaacctggaaaaaagttgaaagaggacagaaaggatatagtggaacgccga
tatagggattgtgatgaattacttaagaactatgaaaaaggagatctagatgctgcaaaa
acactggaagctaacttaacagggtttcttaataaaattcgagaagagactgggaagctc
tgtatggacggattacattggagaaacagtcccttgatcatgtcgcaatgtggttccaag
ggatcccctatcaatatcagtcagatggttacatgtgttggtcagcagacagttaatggt
agccgtgctcctgatggatttatagatcgaagtcttcctcatttccctagaatgtccaga
acacctgaagctaaaggttttgttgctaattcgttctacgacggccttagtgcgacagag
tttttctttcacactatgggaggacgagaaggtctagttgatacagcggtgaaaactgcc
agtacaggttacatgtctcgaagactgatgaaagccttggaggatctcttagtccattat
gataacacagtgcgaaacgccagcggatgcatacttcagtttacttatggggatgatggg
atggacccagcactgatggaaggaaagaatggaacgcctttaaattttgatagattattt
cttaaaattcaggccacttgtcctcctagatcacatcacaattatctttcttcagacgaa
ctgttgcaaaagttcgaagaggagttagtcaggcaagatacaagtcgggtgtgcactgac
gccttcgtgaaatctctaagagaatttgtttgtttgctcggagtaaagtctgcaagcccg
agccagattttctctaaaggatctggtgtgactgataagcaactcgaggtttttgtgaaa
atttgtgtatctcgataccgggggaaaacaattgaacctgggactgcaattggaccaata
ggagctcagagtatcggagaaccagggacacaaatgactctgaaaacttttcactttgct
ggagttgctagcatgaatatcacccaaggagttcctcgaatcaacgaaatcataaatgct
accaaaactataagcacacccgtcatctctgcagaacttgagaaccccctggtagaggct
agtgcccgaatggccaaaggacgcatcgaaaaaactactttaggacaggttgctgagagc
atcgaggtgctaatgacttcaacatcagcgtcagtgaggataacccttgacaagaaaata
atcgaggaggcgtttttgtctataaccccctggtcggttaaaaatgccatactaaagacc
agaatcaaactgcaggatgagaatatcagggtcttagatacgggattagatattattcca
aagggagatcaaaatgggactcatttcactctccacaatctgaagaatgtgctgccaaat
gttatagtgaatgggatcaaaacagttgagcgagtcgttatagcagaggatacagataaa
aagaaagagattggtgggaagaaaagattgaaactgttcgtggagggaacaaacctcctg
gatgtaatggggaccccgggaatcgatgggagaactactacaagcaacaatattgtcgaa
gtgagcaaaacactgggaattgaggctgcaaggacgacaattattgatgaaatagggtca
gtcatgggaaaccatggaatgagtatagacattcgtcacatgatgcttttggctgatgtc
atgacttaccggggggaggtacttgggatacaaagaaccgggatacagaagatggacaaa
agtgtgctgatgcaggcatcttttgagaggactggagatcatttatttagtgcagcaatt
agcgggaaagttgataacatagagggagtcacagaatgtgtgattatgggtataccaatg
aaactcggaaccggaatcctcaaagtcctccaaaagactaagactgaagatctgccaaag
ctgaactatggtgctgatccaatcatctcttga
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