Brassica oleracea (wild cabbage): 106327811
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Entry
106327811 CDS
T04124
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2-like isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106327811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106327811
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106327811
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
106327811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF3276
Motif
Other DBs
NCBI-GeneID:
106327811
NCBI-ProteinID:
XP_013621532
LinkDB
All DBs
Position
C2:complement(38873975..38883319)
Genome browser
AA seq
1149 aa
AA seq
DB search
MVLDHEDLDLMNDDNFVDKKKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVG
IKKIVRANSRITSTLDPSIYLWFKDVYVGEPSILNVGTAEVINPHMCRLADMTYAAPIYV
NIEYVHGIHGKTTISAKDKVVIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVI
KGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSSETTKSKTVIQMEKEKIYLYLHQFV
KKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSMEECISEGVNTRQQALDYLEAKV
KRSSYGPPEKDGRALYILRELFLAHVPVRDDNYRQKCFYVGVMLRRMIEAMLNKDSMDDK
DYVGNKRLELSGQLISLLFEDLFKTMTTEAIKKVDAILQKPNRASRFDFSQCLTGEKNHN
ISFGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGSITKISPQFEKSRKVSGPRS
LQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDQEEGPLVAMCFKLGVTDLEVLSAEE
LHTPDSFLVIFNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHCVYVASDGG
RVCRPLVIAENGESRVKQHHMKELKDGVRTFDDFIREGLIEYLDVNEENNALIALYESEA
MKDVTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDSLLY
LLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGYDIEDAIVMNKASLDRGFERCI
VKKTVVATCQKYGNDTVDRILRPERTGPDAEKMQILDDDGIAAPGEIIRPNDVYINKQIP
VDTRDNITSPPSDTQYRPAREYFKGPEGETQVVERVALCSHKNGNLCIKYNIRHTRRPEL
GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMMELLGSKAGV
SSGRFHYGSAFGEESGHADTVENISKTLVKHRYSYCGKELLYSGLSGEPLQTYVFMGPIY
YQKLKHMVMDKMHARGSGQRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERL
MLSSDPFEVQVCRACGLLGYYDYKLKKAVCSTCKNGDSIATLKLPYACKLLFQELQSMNV
VPRLVLREM
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggtactcgatcacgaagacttagacttgatgaacgatgacaacttcgtcgacaagaag
aagctttcagctcctatcaagtctacagcagataagtttcaactcgtccctgagtttctc
aaggtgagaggacttgtgaagcaacaccttgattcattcaattacttcatcaatgtcggg
atcaagaagattgttcgtgcgaattctcgtattacgtccactctcgacccttccatttac
ctatggtttaaggatgtctatgttggtgaaccctctattttaaatgttggtacggcggaa
gtaatcaatccacacatgtgccgactagctgacatgacgtatgctgctccgatatatgtc
aacatagaatatgttcatggaattcatggaaagacgacgataagtgcaaaggataaggtt
gttatcggaaggatgcctattatgttgaggagttgccgctgtgtattacacggaaaagat
gaagaggaacttgcaagattgggtgagtgcccacttgatcctggaggatattttgtcatc
aaaggaaccgagaaggtgttgttgatacaagaacaactttctaagaataggattattatt
gattctgataaaaaagggaacataaatgcatctgtcacaagcagcagtgaaacaacgaaa
agcaaaacagttattcagatggagaaggagaagatatatttgtatctacatcaatttgta
aaaaagattccaataataatcgtcctaaaagctatgggaatggagagcgaccaagagatc
gtacagatggttggaagggatccccgttttagtgcatcacttctaccttctatggaggag
tgtattagtgaaggtgtgaatacacgacaacaagcactggactatcttgaagcaaaggtg
aagagatcatcgtatggaccacctgaaaaggatggccgagctctatacattctgagagaa
ttattccttgcacatgtacctgtgcgtgatgacaattatcgccaaaaatgtttctatgtt
ggggtgatgttgagaagaatgattgaagcaatgttgaacaaagattccatggatgacaag
gactatgttggtaacaagcggttggagttgtctggacaactaatatctcttctctttgag
gatttgttcaaaacgatgaccaccgaggccattaaaaaagtagatgctatccttcaaaaa
cctaaccgggcaagccgattcgatttttctcaatgtctcactggagaaaagaatcataat
atttcttttggattagaaagaactctttccacgggaaactttgatattaaaaggttcaga
atgcataggaaaggcatgacacaggtcttgacaaggttatctttcattgggagcttgggg
tctattacgaaaatttcgccacagtttgaaaagtccagaaaagttagtgggcctagatcc
ttgcaacccagccagtggggcatgctctgcccatgtgatacccctgaaggagaatcttgt
gggcttgtcaagaatttggctttaatgactcatgtcacaacggatcaagaggaaggccca
ttggttgctatgtgcttcaaattgggtgttacagatctggaagtattgtcagcagaggag
ctgcatactccagactcgtttttggtcatatttaatgggctaatacttggcaaacataga
aggccacagtacttcgccaattcacttagaaggctgcgtagagctgggaaaattggcgaa
ttcgtcagtgtattcataaacgaaaagcagcattgtgtttacgttgcttctgatggtggg
cgggtgtgtcgtccacttgttatagcagagaatggagaatcaagagttaaacaacaccac
atgaaagaactaaaggatggtgttcgcacttttgatgacttcattcgtgaaggtttgatc
gagtatcttgatgttaatgaggaaaataatgcgctgattgctttatacgaaagtgaagcc
atgaaagacgtaacccacattgagattgagcctttcaccatcttaggggttgttgctggt
cttatcccctaccctcaccataatcagtcgcctagaaatacttaccagtgcgctatggga
aaacaagcgatgggaaatattgcttacaaccagttaaaccggatggactctttgctttac
ctattggtgtatcctcaacgacccctgttgacaacgagaacaattgaattggttggatac
gataaacttggagcaggtcaaaatgcaacagttgctgtgatgagtaatactgggtacgat
attgaggatgcaattgtgatgaacaaagcttccttagatcgtggttttgaacgctgcatt
gttaagaaaacagttgttgctacttgccagaagtatggtaacgatacagtggacagaata
ctaaggccagaaagaacaggtccagatgctgaaaagatgcagatactggatgatgatgga
atcgctgctccaggggaaattattagaccgaatgatgtgtatataaataaacaaatccct
gttgacaccagagataacattacatctccgccatcagacactcaatatcgtccggccaga
gagtattttaaaggtcctgaaggggagacacaagtggtcgaaagagttgctctctgttct
cacaagaacggtaatttatgcataaagtataacatccgacatactcgtcgaccagagctt
ggagacaagttcagcagtaggcatgggcagaaaggtgtttgtggtacaatcgttcagcaa
gaagattttccattttctgaacgtggaatttgccctgatttgatcatgaatcctcatggg
tttccaagtcgtatgacagtaggtaagatgatggaacttcttggaagtaaagctggggtg
tcttctggtagatttcattatggtagtgcttttggagaagaaagtggtcatgctgacacg
gttgaaaatataagtaagacccttgtgaagcatcgctattcctactgtgggaaggagttg
ttatactcaggtctcagtggcgagccattgcaaacatacgtctttatggggccaatatat
taccagaaactgaaacacatggtcatggacaaaatgcatgcgcgagggagtggacagcgt
gtgatgatgacaagacagccaactgaagggaaatctaaaaatggaggtttacgagtggga
gaaatggaacgagattgtcttattgcttatggagccagcatgttgatctatgagcgtctc
atgctctctagtgatccttttgaagttcaggtttgcagagcttgcggtttattgggatat
tacgattacaagctgaagaaggcagtttgttcaacttgtaaaaatggtgatagcattgct
actttgaaactcccttacgcatgcaagctccttttccaggaactgcagtcgatgaatgtt
gttccgcgtcttgttctaagggaaatgtag
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