Rhodophyticola sp. CCM32: E2K80_04135
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Entry
E2K80_04135 CDS
T05925
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo03030
DNA replication
boo03410
Base excision repair
boo03420
Nucleotide excision repair
boo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2K80_04135 (polA)
03410 Base excision repair
E2K80_04135 (polA)
03420 Nucleotide excision repair
E2K80_04135 (polA)
03440 Homologous recombination
E2K80_04135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boo03032
]
E2K80_04135 (polA)
03400 DNA repair and recombination proteins [BR:
boo03400
]
E2K80_04135 (polA)
Enzymes [BR:
boo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2K80_04135 (polA)
DNA replication proteins [BR:
boo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E2K80_04135 (polA)
DNA repair and recombination proteins [BR:
boo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E2K80_04135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2K80_04135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QBY00028
UniProt:
A0A4P7JEA9
LinkDB
All DBs
Position
856985..859783
Genome browser
AA seq
932 aa
AA seq
DB search
MADATFGKGHHLHLVDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMIHKMIEGNTGP
DAPTHAAVVFDKGSHTFRNEIYDQYKANREAMPEDLRPQIPLTREATRAFNLACLEMQGF
EADDIIATLARQAREAGGRCTIISSDKDMMQLVGGGVEMLDAMKNTRIDVEGVEAKFGVG
PNRVIDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDALLERADEIKQPKRRETLIN
FADQIRLSKRLVTLDDQTPIEVALTDLEVKDPEPDTLMAFLAEMEFRTLTRRVAEQLGVE
APEIADTAPPAEGAPEAVGFDISAYETVRDMDALAQWIAKAHAFGAVAVDTETTGLNEMT
ADLVGICLSTAAGEGCYIPVGHMEGGDDLFGGAKLSEGQLALEDVLAALKPMLEDASVLK
IGQNMKYDAKILARYGIMIAPIDDTMLMSYAMHAGLHNHGMDTLSDRYLGHQPIPIKSLL
GSGKSQITFAQTSIADAAPYAAEDADITFRLWQRFKPGLHRAQVTTVYETLERPLVPVLA
RMEMAGIKVDRDTLSRMSNAFAQKMAGLEADIHALADTPFNVGSPKQLGEILFDRMGLEG
GKKGKTGAYATGADVLEDLAAQGHDLPARVLDWRQLSKLKSTYTDALQDHINPDTGRVHT
SYSIAGANTGRLASTDPNLQNIPVRTEEGRRIREAFIAEPGKVLVSLDYSQIELRILAHI
AGIDALKQAFKEGQDIHAITASEMFNVPLDQMTPDVRRQAKAINFGVIYGISGFGLARNL
RIPRAEAQGFIDRYFERFPGIRAYMDATKEFAKSNGYVQTLFGRKIHTPEINAKGPKASF
AYRAAINAPIQGTAADVIRRAMIRMEAAIDGLPAKMLLQVHDELLFEVEEDAVDSLITRA
REVMEGAAHPAVDLSVPLTVDAGQGAHWAEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgcgacattcggcaaagggcatcacctgcatctggtggatggctcggccttc
atcttccgcgcctatcatgccctgccgccgctgacgcgcaaatccgacgggctgccgatc
ggcgcggtcgcggggttctgcaacatgatccacaagatgatcgaggggaataccggcccc
gatgcgccgacccatgcggcggtggtgttcgacaagggctcccacacgttccgcaacgag
atttacgaccagtacaaggccaaccgggaggcaatgcccgaagacctgcgcccgcaaatc
cccctgacccgggaggcgacccgggccttcaatctggcctgtcttgagatgcaggggttc
gaggccgatgacatcatcgccaccctggcccggcaggcgcgcgaggccggcgggcgctgc
acgatcatctcgtcggacaaggacatgatgcaactggtcggcggcggcgtcgaaatgctg
gatgcgatgaagaatacccggatcgacgtggaaggcgtcgaggccaaattcggcgtcggt
ccgaaccgggtgatcgacgtgcaggccctggctggcgacagcgtcgacaatgtgccgggc
gcgccggggatcgggatcaagaccgcggcgctgctgatcaatgaatatggcgatctggac
gcgctgctggagcgcgcggatgagatcaaacagcccaagcgccgcgagacgttgatcaat
ttcgcggatcagattcgcctgtcgaaacggctggtgacactggatgatcagaccccgatc
gaggtggcgctgacggatctggaagtgaaagacccggaacctgacaccctgatggcgttt
ctggcggagatggagtttcgcaccctgacccgccgggtggccgaacaattgggggtggag
gcgcccgagatcgcggatacggccccgcctgcggagggcgcgccggaggcggttggcttc
gacatttccgcctatgagaccgtgcgcgatatggatgcccttgcgcagtggattgccaag
gcccatgccttcggcgccgtggcggtggatacggaaaccacgggtctgaacgagatgacc
gccgatctggtcggtatctgcctgtccactgcggcgggcgaggggtgttatatccccgtg
ggccatatggaaggcggcgatgacctgttcggcggggccaagctttccgagggccagctg
gctctggaagatgtcctggccgcgctgaaaccgatgctggaggatgcaagcgttctgaag
atcggtcagaacatgaaatatgacgcgaagatactggcccgctacggcatcatgatcgcg
ccgatcgacgacacgatgctgatgtcctatgcgatgcatgcgggcctgcataatcacggt
atggataccctgtctgaccgctatctcggccaccagccgatcccgatcaaatccttgctg
ggaagcggaaaatcccagatcacattcgcccagaccagcattgccgatgcggcaccttac
gcggcggaggatgcggatatcacctttcgcctctggcagcggttcaagccggggctgcac
cgggcgcaggtgaccacggtctatgaaaccctcgaacgcccgctggtgccggttctggcc
cggatggagatggcgggcattaaggtggaccgcgatacgctgagccggatgtccaatgcc
tttgcccagaaaatggccgggcttgaggcggatattcacgcgctggcggacacaccgttc
aatgtgggcagccccaagcagttgggcgaaatcctgtttgaccggatggggctggaaggc
ggcaagaaaggcaagaccggggcctatgccaccggcgccgatgtgctggaagacctggcc
gcgcagggccatgacctgcccgcccgcgtgctggactggcgtcagctcagcaagctgaaa
tcgacctatacggacgcgcttcaggaccatatcaaccctgatacgggccgggtgcataca
agctattccattgccggggcgaataccgggcgactggcctcgaccgacccgaatttgcag
aacattccggtgcgcaccgaagaggggcggcggattcgcgaggcgtttattgcggaaccg
ggcaaggttctggtctcgctggattattcccagatcgagctgcggatactggcccatatc
gcgggtattgatgcgctgaaacaggcgttcaaagaggggcaggatatccatgcgatcact
gcgtccgagatgttcaatgtgccgctggaccagatgacaccggatgtgcgccgtcaggcc
aaggcgatcaatttcggggtgatctacgggatttccggctttggtctggcgcgcaatctg
cgcatcccccgggccgaggcgcagggcttcatcgaccggtatttcgaacgtttcccgggc
attcgcgcctatatggatgcgacaaaagaattcgcgaaatcaaacggttatgtgcagaca
ctgttcgggcggaaaatccatacgcccgagatcaatgccaagggccccaaagccagtttc
gcctatcgcgcggcgatcaacgcgccgatccagggcacggcggcggatgtgatccgccgg
gcgatgatccgcatggaggcggcgattgacgggctgcctgcgaagatgctgcttcaggtc
catgatgaattgctgttcgaggttgaagaggatgcggtggacagtctgatcacccgggcc
cgcgaggtgatggaaggggccgcacatccggcggtggacctgtcggtgccgctgacggtg
gatgcaggccagggcgcacattgggccgaggcgcattga
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