Bipolaris oryzae: COCMIDRAFT_109060
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Entry
COCMIDRAFT_109060 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
bor
Bipolaris oryzae
Pathway
bor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COCMIDRAFT_109060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bor03032
]
COCMIDRAFT_109060
03036 Chromosome and associated proteins [BR:
bor03036
]
COCMIDRAFT_109060
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_109060
Enzymes [BR:
bor01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
COCMIDRAFT_109060
DNA replication proteins [BR:
bor03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
COCMIDRAFT_109060
Chromosome and associated proteins [BR:
bor03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
COCMIDRAFT_109060
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
COCMIDRAFT_109060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARP
PARP_reg
WGR
BRCT
PTCB-BRCT
BRCT_2
LIG3_BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
19119359
NCBI-ProteinID:
XP_007693137
JGI:
Cocmi1_109060
UniProt:
W6Z9I2
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MPRKAASKAAPKAAPPLDGCSVATSGRFPGTSQSALQSRLTSLGATIASSVTANTTHLIA
TEKDYESNSTKTKAAAAHDVPVVTIEWLDECESKGSKVDETQYLLSSGAAPAQRNGSNKR
PASTTPPAQSQEKKPKIKEDAKVGDGQNAKSKTIAISIDEYCPLGNYQVYIDSNGTIYDA
SLNQTNASANNNKFYKCQLLVNGSDYKTWTRWGRVGERGSSAVLGSGSLYDAKREFEKKF
KDKSGLRWEDRSAEPKANKYAYVEHSYNPDSDDEDEDTGANADDENKDAVKPAECTLDKP
TQDLMKLIFNQDYFDATMSALNYDANKLPLGKLSKGTIARGFQALKELSVLLDNTDAASR
AEVERLSNHYFSVIPHAFGRNRPPVIRDNDALKKEIELLESLSDMKETAAMLKSQLKDDS
GIHKLDKQFQGLGMEEMTPLDHKSQEFVEIDQYLNCSRGHTHSVSYNVQDIFRIERKGEF
ERFDKSKFSKISSNRRLLWHGSRVTNFGGILSQGLRIAPPEAPVSGYMFGKGIYLADMSS
KSANYCASYNSGGTALLLLCEAELGNPMHQLTNASYTAGEDAIKNGMYSTWGMGSTGPSK
WKDASCINPALKGCSMPDVSTPPGKTNVAGAYLMYNEYITYDVAQVKLRYLLRVRM
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaagctgcatcaaaggccgccccaaaggccgcaccaccgctggatggatgc
tccgtcgctacatctggccgcttcccgggaacatcacaatccgcacttcagtcgcgtctt
acgtcactgggtgctacgattgcatcaagtgtcacggcaaacacgacccatctcattgca
actgaaaaggactatgagagcaactcgaccaagaccaaagctgccgctgcccatgacgtg
cctgtagtgaccattgaatggctcgacgaatgcgagtccaaaggctctaaggtagatgaa
acgcagtacttgctgtcgtctggcgctgctcctgcgcagaggaacggttcaaacaaacgg
cctgcctctactactcctccagcacaatctcaagaaaagaaacccaagattaaggaagac
gccaaggtaggagatggccagaatgcaaaatcaaagacaattgccatctccatagacgaa
tattgccctcttggaaactatcaggtctacattgactctaatggcactatatacgatgca
tcgctcaatcaaaccaacgccagtgctaataataacaagttttacaaatgccagcttctt
gtcaatggatcagactataaaacttggactcgctggggccgcgttggtgagcgtgggtcg
agcgccgtgttgggcagtggcagcttatatgacgccaaacgggaatttgaaaagaagttc
aaggacaagtcaggtctcagatgggaggatcgcagtgcagaaccaaaggcaaataaatac
gcatatgtggagcattcgtacaaccctgactcggatgatgaggacgaggacacaggtgcg
aatgcggacgacgaaaacaaagatgctgtcaagcccgccgagtgcacgcttgacaagcct
acacaggaccttatgaagctcatcttcaaccaggattatttcgatgccaccatgtctgcc
ctcaattacgacgcaaacaaactaccactgggcaagctcagcaagggaacaattgctcgt
ggtttccaagccctgaaggagctgtctgtgcttctagacaacaccgatgcagcatcgcga
gcagaggtagaacgtctgtccaaccactacttttcagtgatcccccacgccttcggccgc
aaccgtccgccagtcattcgagacaacgacgcccttaagaaagaaattgagctactcgag
agtctgtcagacatgaaggagactgccgccatgctcaagagccagctgaaggacgatagc
ggcattcacaagctcgacaagcaattccagggtctcggtatggaagagatgacaccactt
gaccacaagagccaggagtttgtcgaaatcgaccagtatctcaattgctcaagaggacat
acgcattcagtcagttacaatgtccaagatatcttccgcatcgaacgcaagggcgaattc
gagcggtttgacaagagcaagttctccaagatttcaagcaaccgtcgtctcctatggcac
ggttcccgtgttactaactttggtggaatcctcagccaaggtctccgcatcgcacctccc
gaagcccccgtatcaggctacatgttcggcaaaggtatctacctcgccgatatgtcttcc
aagtccgcaaactactgcgcctcgtacaactcgggtggcactgctttgctcctcctttgc
gaggctgagttgggtaacccgatgcaccagctcaccaatgcctcgtacactgctggtgaa
gatgcgatcaagaatggcatgtatagtacgtggggaatgggctcaacaggcccgagtaag
tggaaggatgcaagctgcatcaatcctgcgctgaagggatgctcaatgcccgatgtatcg
actccgcctggcaagacgaatgtggctggagcatacttgatgtacaatgagtacattacg
tatgatgttgcgcaggtgaagctgcggtacttgctccgtgtccgcatgtag
DBGET
integrated database retrieval system
