KEGG   Bipolaris oryzae: COCMIDRAFT_93737
Entry
COCMIDRAFT_93737  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
bor  Bipolaris oryzae
Pathway
bor03020  RNA polymerase
bor03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    COCMIDRAFT_93737
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCMIDRAFT_93737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bor03021]
    COCMIDRAFT_93737
   03400 DNA repair and recombination proteins [BR:bor03400]
    COCMIDRAFT_93737
Transcription machinery [BR:bor03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     COCMIDRAFT_93737
  RNA polymerase III system
   RNA polymerase III
     COCMIDRAFT_93737
  RNA polymerase I system
   RNA polymerase I
     COCMIDRAFT_93737
DNA repair and recombination proteins [BR:bor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      COCMIDRAFT_93737
SSDB
Motif
Pfam: RNA_pol_Rpb6 KH_1
Other DBs
NCBI-GeneID: 19128318
NCBI-ProteinID: XP_007687370
JGI: Cocmi1_93737
UniProt: W6ZF47
LinkDB
Position
Unknown
AA seq 125 aa
MGGGGEDPDNADPNDDNVVVSGDASAAAAAREAAKNTVTSEKDKKVPNDKRTTTPYMTKY
EKARVLGTRALQISGNAPVLIDVEGMTDPLQIAAKELQEKKIPLVVRRYLPDGFYEDWTC
EELLT
NT seq 378 nt   +upstreamnt  +downstreamnt
atgggcggcggcggcgaggacccagacaacgccgatcccaacgacgacaacgtagtggta
tccggcgatgccagcgcggctgctgcagccagagaggcagccaaaaacactgtcacgagc
gagaaagacaagaaggtccccaacgacaagcgcacaaccacgccatacatgaccaagtac
gaaaaggcgcgtgtgctcggtacaagagcgctccagatcagtggaaacgccccggtattg
attgatgttgagggcatgacggatcctctgcagattgctgccaaggaattgcaagagaag
aagattccgctggttgtacggagatatctgcctgatggtttctacgaagactggacttgt
gaagaactcttgacataa

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