Bacillus pacificus: LMD38_00120
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Entry
LMD38_00120 CDS
T07947
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
bpac
Bacillus pacificus
Pathway
bpac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMD38_00120 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpac03021
]
LMD38_00120 (rpoE)
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_00120 (rpoE)
Transcription machinery [BR:
bpac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMD38_00120 (rpoE)
DNA repair and recombination proteins [BR:
bpac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMD38_00120 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
ColG_sub
2Fe-2S_thioredx
Sigma70_r4
GerE
Pox_EPC_I2-L1
Motif
Other DBs
NCBI-ProteinID:
UEP94851
LinkDB
All DBs
Position
33708..34241
Genome browser
AA seq
177 aa
AA seq
DB search
MDFKQYSPEELKECSMIEVVHSVLGDKKQATTFNELVQEIAQVLGLSQEQVNAKIAQFYT
DLNIDGRFINLGENRWGLRSWYPYEQIDEEILPQPKPKKKRKVEEDGFDDYIDEDEDDFD
DVDGNEDEDDDVEDLDKVLEDEDGDDDDLDDLDEDEDDFAEEELEYDETEEEEEEEL
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtggattttaagcaatattcaccagaagagctaaaagaatgttcaatgattgaagttgta
catagcgttttaggggataaaaaacaagcaacgacattcaacgagttggttcaagaaatc
gctcaagtgctgggactatctcaagagcaagttaatgcgaaaatcgcacaattttataca
gacttaaacatcgatggacgtttcattaatttaggagaaaatcgttgggggctacgcagc
tggtacccatacgagcaaattgatgaagaaatcttgcctcaaccaaaaccgaagaagaaa
cgtaaagttgaagaagacggttttgacgactacattgacgaagatgaagatgactttgat
gatgtagatggaaatgaagacgaagatgatgatgtagaagatttggacaaggttcttgaa
gacgaagacggagacgacgatgatcttgatgatttagacgaagatgaagatgacttcgct
gaagaagaacttgagtatgatgaaactgaagaagaagaagaggaagaactgtag
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