Bradyrhizobium pachyrhizi: QA639_04070
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Entry
QA639_04070 CDS
T09303
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpah
Bradyrhizobium pachyrhizi
Pathway
bpah03030
DNA replication
bpah03410
Base excision repair
bpah03420
Nucleotide excision repair
bpah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QA639_04070 (polA)
03410 Base excision repair
QA639_04070 (polA)
03420 Nucleotide excision repair
QA639_04070 (polA)
03440 Homologous recombination
QA639_04070 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpah03032
]
QA639_04070 (polA)
03400 DNA repair and recombination proteins [BR:
bpah03400
]
QA639_04070 (polA)
Enzymes [BR:
bpah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QA639_04070 (polA)
DNA replication proteins [BR:
bpah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QA639_04070 (polA)
DNA repair and recombination proteins [BR:
bpah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QA639_04070 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QA639_04070 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WFU56718
LinkDB
All DBs
Position
complement(900971..904009)
Genome browser
AA seq
1012 aa
AA seq
DB search
MPKTASKAPAKPASKTAPKPVAARATAKGDHVFLVDGSSYIFRAYHALPPLNRKSDGLQV
NAVLGFCNMLWKLLRDMPEDNRPTHLAIVFDKSEITFRNKLYPDYKAHRPPAPDDLIPQF
ALIREAVRAFELPCLEQVGFEADDLIATYARLASERGATTTIVSSDKDLMQLVNDKVVMY
DTMKDRRIGRDEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIGIKTAAQLIIEYGDLD
QLLFRAGEIKQPKRREALLENAEKARISRQLVLLDDKVDLEVPLDDLAVNEPDSRRLIAF
LKAMEFTTLTRRVADYAQIDPANVDADPGNKSGASVFSPLPPSDVTPAPGDAPTSTAAPL
PKAKPSGARDDKNSNRKGTPAALAEARGEAIRKTGFDRKAYQAIGSLDQLNAFIARVPDT
GYVAIEAMSESIDPMQGELAGLALALAPNDACYVPLSHRQAGGGAGLFDAGLAPGQIKTA
EALAALRPLLESVGIQKVGFDVKFTSVMLAQHGITLRNIDDAQLMSYALDAGRGSHALEA
LAERWFGHAVVNYGGLVGSGKGKLTFDQVTIDKASEYAAESADVILRLWRVLKPRLVAER
MATVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEIQEIAGEPVNVG
SPKQIGDIIFGKMGLPGGSKTKTGAWSTTAQVLDELAEQGHEFPKKILEWRQVSKLKSTY
TDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRRAFIATPGHK
LVSADYSQIELRLLAEIADVPVLRQAFRDGLDIHAMTASEMFGVPIKDMPSEVRRRAKAI
NFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETKDFCRRNGYVTTLFG
RKCYYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMIRVEDALTGKKLSAQMLLQV
HDELIFEVPDDEVAATLPVVQKVMQDAPFPAVILSLPLQVDARAANNWDEAH
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaacagcctccaaagcccccgccaagcccgcatcgaagaccgcccccaagccc
gttgccgccagggccacggcgaagggcgaccatgtcttcctggtcgacggctcgtcctac
atcttccgcgcctaccacgcgctgccgccgctgaaccgcaaatccgacgggctgcaggtc
aacgccgtgctcggcttctgcaacatgctgtggaagctgttgcgcgacatgcccgaggac
aaccggccgacgcatctggcgatcgtgttcgacaagtcggagattacgttccgcaacaag
ctctatcccgactacaaggcgcaccggccgccggcgcccgacgatttgattccgcaattc
gcgctgatccgcgaggcggtacgggccttcgaattgccctgcctcgagcaggtcggcttc
gaggccgacgatctgatcgcgacctatgcgcggctcgccagcgagcgcggcgcgaccacg
acgatcgtgtcatcggacaaggatctgatgcagctcgtcaacgacaaggtcgtgatgtac
gacacgatgaaggatcgccgcatcggccgcgacgaggtgatcgagaaattcggcgtgccg
ccggagaaggtggtcgaggtgcaggcactggccggcgactctaccgacaacgtgcccggc
gtgcccggcatcggcatcaagaccgccgcgcagctgatcatcgaatatggcgatctcgat
cagctgctgttccgcgccggcgagatcaagcagccgaagcggcgcgaggcgctgctcgag
aacgccgagaaggcgcggatctcgcgccagctcgtgctgctcgacgacaaggtcgacctc
gaagtgccgctcgacgacctcgccgtgaacgagcccgactcgcgccggctgatcgccttc
ctcaaggcgatggagttcaccaccctcacccgccgcgtcgccgactacgcgcagatcgac
ccggccaatgtcgatgccgatcccggcaacaagagcggcgcgagcgtgttctctccgttg
ccgccgtcggatgtgacgccggcacccggagacgctccgacatcgactgcggccccgctg
ccgaaagccaagccgagcggcgcgcgcgacgacaagaattcgaaccgcaagggcacgccg
gcagcgctggccgaggcccgcggcgaggcgatccgcaagaccggcttcgaccgcaaggcg
tatcaggcgatcggcagtctcgaccagctcaacgccttcatcgcccgcgtgcccgacacc
ggctatgtcgcgatcgaggcgatgtcggaatcgatcgacccgatgcagggcgagctcgca
ggccttgcgctggcgctggcgccgaacgatgcgtgttacgtcccgctcagccacaggcag
gccggcggcggcgcgggcctgttcgatgccggcctcgcacccggccagatcaagacggcc
gaggcattggcggcgctgaggccgctgctggagtccgttggaatccagaaggtcggcttc
gacgtcaagttcacctcggtgatgctggcacagcacggaattaccctgcgcaacatcgac
gatgcgcagctcatgagctacgcgctcgatgccggccgcggctcacatgcgctggaggca
ctcgccgagcgctggttcggccacgccgtcgtcaattacggcggcctcgtcggcagcggc
aagggcaagctgaccttcgatcaggtcacgatcgacaaggccagcgaatatgcggccgaa
agcgccgacgtgatcctgcggctgtggcgggtgctgaagccgcgcctcgtcgccgagcgg
atggcgacggtgtatgagacgctggaacggccgctggtctcggtgctcgcgcggatggag
cggcgcggcatctcgatcgatcgccaggtgctgtcgcggctgtcgggcgatttcgcccag
accgcggcgcgcgtcgaggccgagatccaggagatcgccggcgagccggtcaatgtcggc
agcccgaagcagatcggcgacatcatcttcggcaagatgggattgcccggcggcagcaag
accaagaccggcgcgtggtcgaccaccgcgcaggtgctcgatgaactcgcggagcaaggc
cacgaattcccgaagaagatcctggagtggcgccaggtctcgaagctgaaatcgacctac
accgacgcgctgccgacctacgtcaatccgcagacccatcgcgtccataccacctacgcg
ctggccgcgaccacgacgggccggctgtcgtcgaacgagccgaacctgcagaacatccct
gttcgtaccgaggacggccgcaagatccgccgcgccttcatcgcgacacccggccacaag
ctggtgtcggccgactactcgcagatcgagttgcggctgcttgccgagatcgccgatgtg
ccggtgctgcgccaggcgttccgcgacgggctcgacattcacgccatgaccgcttccgaa
atgttcggcgtgccgatcaaggacatgccgagcgaggtgcgccgccgcgccaaggcgatc
aacttcggcatcatctacggcatctcggcgttcggcctcgccaaccagctcggcatcgcg
cgcgaggaggcctcggcctacatcaagaaatacttcgagcgcttcccgggcatccgcgcc
tatatggacgagaccaaggatttctgccgccgcaacggctatgtgacgacgctgttcggc
cgcaagtgctactaccccgacatcaaggcctccaacgcctcggtgcgcgccttcaacgaa
cgcgccgcgatcaatgcgcgcctgcagggcaccgcggccgacatcatccgccgcgccatg
atccgcgtcgaggacgcgctgaccgggaagaagctctcggcgcagatgctgctgcaggtg
cacgacgaactgatcttcgaggtgcccgacgacgaggtcgcggcgacgctgccggtggtg
cagaaggtgatgcaggacgcaccgttcccggcggtgatcctgtcgctgccgctgcaggtc
gacgctcgcgccgccaacaactgggacgaggcgcattga
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