Bordetella pertussis CS: BPTD_0951
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Entry
BPTD_0951 CDS
T01846
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bpc
Bordetella pertussis CS
Pathway
bpc00540
Lipopolysaccharide biosynthesis
bpc01100
Metabolic pathways
bpc01250
Biosynthesis of nucleotide sugars
Module
bpc_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BPTD_0951 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bpc01005
]
BPTD_0951 (rfaD)
Enzymes [BR:
bpc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
BPTD_0951 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bpc01005
]
Core region
BPTD_0951 (rfaD)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
AEE66375
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Position
1017129..1018118
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AA seq
329 aa
AA seq
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MIVVTGAAGFIGSNLVRGLNRRGIQDIIAVDDLTDGDKFRNLVDCSIADYLDKDEFRERV
RGGNLPALRAVLHQGACSDTTERNGRYMLDNNYRVTLELFEYCQAERVPFLYASSAAVYG
GSSVYVEDPANEHPLNVYGYSKLLFDQVLRTRMDSLTAQVVGLRYFNVYGPHEQHKGRMA
SVAFHNMNQFLAEGHVRLFAGWDGYEDGGQSRDFISVEDVVAVNLHFLDNPDQSGVFNCG
TGRAQPFNDVAAAVVNTLRAERGEAALPLAELVKKGLLRYIPFPDDLKGRYQSYTQADVS
RLRATGFSAPMRDVQTGVSEYVRYWRALK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggtgaccggcgcggccggctttatcggcagcaatctggtgcgcggcctgaac
cggcgcggcatccaggacatcatcgccgtcgacgacctgaccgacggcgacaaattccgc
aacctcgtcgattgcagcatcgccgactatctcgacaaggacgagttccgcgaacgcgtg
cgcggcggcaacctgccggccttgcgtgccgtgctgcaccagggcgcctgctcggacacc
accgagcgcaacggccgctacatgctggacaacaactaccgcgtcacgctggaactgttc
gagtactgccaggccgagcgcgtgccgttcctgtacgcctcgtcggccgcagtctacggc
ggttcgtcggtgtatgtggaagacccggccaacgagcatccgctcaatgtgtacggctat
tccaagctgctgttcgaccaggtgctgcgcacgcgcatggacagcctgaccgcccaggtg
gtggggctgcgctatttcaacgtgtacgggccgcacgagcagcacaagggccgcatggct
tcggtggccttccacaacatgaaccagttcctggccgaaggccatgtgcgcctgttcgcc
ggctgggatggctacgaggacggcgggcagagccgcgatttcatttcggtcgaagacgtg
gtggcggtcaatctgcatttcctcgacaaccctgaccagtcgggcgttttcaactgcggc
accgggcgcgcccagccgttcaacgacgtggccgcggcggtggtcaataccctgcgcgcc
gaacgcggcgaggcggcgctgccgctggccgaactggtcaagaagggcctgctgcgctat
atcccgttcccggacgatctgaaagggcgctaccagagctacacccaggccgacgtcagc
cggctgcgggcgaccggcttcagcgcgccgatgcgcgatgtacagactggcgtatcggaa
tacgtgcgctattggcgcgccctgaagtag
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