Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163851
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Entry
110163851 CDS
T05002
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1-like
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110163851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpec03019
]
110163851
Enzymes [BR:
bpec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
110163851
Messenger RNA biogenesis [BR:
bpec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
110163851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_22
TniB
AAA_16
AAA_18
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
110163851
NCBI-ProteinID:
XP_020784520
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MATEVLEKPTEDVPPGKVGTRFDLEKETELRFEVEAGDGAEQVELELLSGMAEVFGSELN
RNKKYTFGPGAKIAVFTWQGCSVNLYGKPEVAYVSKDTPMLLYLNTHAALEQMRKQAEKD
NERGPRVMVVGPTDVGKSTVCRLLLSYAVRVGRRPTFVELDVGQSGVSVPGTVSALCIER
PADVEEGFSVQAPLVYHFGSTTPGTNIKLYNKLTSCLAEVFSQRCEVNRKASVGGCIINT
CGWVKGSGYQALVHCASAFEVDVVLVLDHERLYNELKRDLPHFVRVVLLPKSGGVVERSK
ECRRDARDEKIREYFYGFRGVTFYPFSYEVRFSDVRIYKIGAPSIPDSCLPLGMSQDDTQ
LKLVPVTPGRDLTYHVLSVSSADDGEDGVRKGIVETPVCGFIVVTNVDTQAQVMKVLSPA
PRPLPRHTLLIMDIRFMDMK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaggttttagaaaagccaactgaggatgttccacctggaaaagtcggcacc
agatttgacctggaaaaggagactgagctcagattcgaggtggaagccggtgatggagct
gaacaggttgagctagagctactgtctggcatggcagaggtgtttggatcagaactgaat
cgaaacaaaaaatacacatttggtcctggtgctaagatcgctgtgtttacttggcaaggc
tgtagtgtaaatctgtatgggaaaccagaggtggcttatgtctctaaggacaccccaatg
ttgctttacctaaacacccacgctgcactagaacagatgagaaaacaagcagaaaaggac
aatgagagggggccaagggtaatggttgtgggccctacagatgtgggcaagtcaacagtc
tgtcgtttgctactcagctatgctgtaagagtgggaagaaggccaacgtttgtagagctg
gatgttggtcaaagtggggtgtctgtccctggaacagtttctgcactatgcattgaaaga
ccggctgatgttgaagagggtttttcagttcaggcgccactggtataccactttggctca
actaccccaggaacaaacatcaaactttacaacaagctaacatcttgcctagctgaggta
ttttcacaacgctgcgaggtgaacagaaaggcgagtgtgggaggatgcataataaacacc
tgtggatgggttaaaggctctggctaccaggctctagtccactgtgcatctgcctttgaa
gttgacgtggtgttggtacttgaccacgagagactctacaatgagctgaagagagacctt
ccccactttgtcagagttgtgctccttcccaagtctgggggagttgtggagcgatccaag
gagtgccgacgcgatgctcgtgatgagaagatccgtgaatacttttatggcttccgtggt
gttaccttctatccattctcttatgaagtgcgcttctctgatgtccgtatctacaaaatt
ggagcaccatcaatcccggactcatgcttgcccttaggaatgtctcaagatgatacacag
ttaaagttggtaccagtaactccaggtagagatcttacatatcacgtgttaagtgtaagt
agtgcagacgatggagaggacggggtaaggaagggtatagttgagacccctgtgtgcggt
tttattgttgtgacaaatgtggacacccaagctcaggtgatgaaagtgctctccccagct
cctcgacctctaccaagacacacactgctgataatggacattagattcatggacatgaag
tag
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