Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110165498
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Entry
110165498 CDS
T05002
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04010
MAPK signaling pathway
bpec04210
Apoptosis
bpec04218
Cellular senescence
bpec04620
Toll-like receptor signaling pathway
bpec04621
NOD-like receptor signaling pathway
bpec04622
RIG-I-like receptor signaling pathway
bpec04623
Cytosolic DNA-sensing pathway
bpec04625
C-type lectin receptor signaling pathway
bpec04920
Adipocytokine signaling pathway
bpec05132
Salmonella infection
bpec05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110165498 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110165498 (nfkb1)
04218 Cellular senescence
110165498 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110165498 (nfkb1)
04621 NOD-like receptor signaling pathway
110165498 (nfkb1)
04622 RIG-I-like receptor signaling pathway
110165498 (nfkb1)
04623 Cytosolic DNA-sensing pathway
110165498 (nfkb1)
04625 C-type lectin receptor signaling pathway
110165498 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
110165498 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110165498 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
110165498 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110165498 (nfkb1)
Transcription factors [BR:
bpec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
110165498 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
110165498
NCBI-ProteinID:
XP_020786357
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MATDDPYLHPPQMFEMMDPTWDYNPYPVLTQNPTLRTVDGPYLQIIEQPKQRGFRFRYGC
EGPSHGGLPGASSEKNRKTYPTVKICNYQGPARVVVQLVTVTHHPQLHAHSLVGKQCDKG
ICIADLQPKDSTISFPNLGILHVTKKNVAKTLEERMVEAFKMGYNCGVQIHPDIDAQQGE
VRTPRELTDQQRSLISSVACLQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSEPIYD
SKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDNSGVTWQALGDFS
PTDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQR
KRQKTLPNFQDFSGPHGGAAGGGLYRGGGPGGGGGGGYYQNFTSFNYGSSGAAGGFSGGY
SASLGSGAGAKHASRSSSADDGDPDDDSSSGAVLKNTTQKRDSRLGQSEEGGGGPPADRT
DDAARRQVEALFQFSVSGNPAFLLAPQRHLLSVQDEDGDTGLHLAVLHSQQEALQSLIQV
LSVFSTEELLNMRNHLYQTPLHLAVLTQQKDAVDTLLLAGADPALTDRHGNTALHLATAQ
EVGDMTSHLLQRPQVRALMGVANTAGQCPLHMAVLSNRLSSLRSLLQSGADVELQERTSG
RTPLHLATEADNVSLAGCLLLEGNARVDSCTFDGSTPLHVAAGRGSAKLTALLMAAGADP
LRENLEPLYMCEEEEEDEGYVPGTTPLNMAANAQVLELLNGKEYEPKPPQYPLSPPQGDL
CSLELSLKQEVCRALDTEGLWETLSHGLGLGILNNAFRLSSCPAKSLLDSYEVSGGTVKE
LMAALKSVGGCTALNVLQEAQQLSPTTDTPQDSTERLPELLQDLKLDVREDSGLCDSGVE
LSVV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggccactgacgacccgtacctccaccctccccagatgtttgagatgatggacccgacc
tgggactacaacccgtacccggtcctgacccagaatccaacgctgcgcacagtggatggt
ccatatctccaaattattgaacagccaaaacagagaggcttcaggttccggtacggctgt
gagggcccgtcacacggaggtctgccaggggcctccagcgagaagaacaggaaaacatac
cccactgtgaagatctgtaactaccagggcccagcacgagtggtggtgcagctggtcaca
gttactcatcatcctcagcttcacgcgcacagtctcgtgggcaaacagtgtgacaaggga
atctgcatcgccgacctgcagcccaaagactctactatcagttttccaaacctgggcatc
ctccacgtgaccaagaagaacgtggccaagaccctggaggagcgcatggtggaggccttc
aagatgggctacaactgtggagtccagatccacccagacatcgacgcccagcagggggag
gtccgcacgcccagagaactcacggaccagcagcgcagtctgatctcgtccgtggcctgt
ctccagtccaaagagatggatctgagcgtggtccgactcatgttcaccgccttcttgccc
gacagtgatggaggattctctcggaggctggagccggtggtgtctgagcccatctacgac
agcaaggctccgaacgcttcaaacctgaagatcgtacggatggaccggacagcaggatgt
gtgaccggaggagaggaggtctacctgctctgtgacaaagtacaaaaagatgatatccaa
gtgcgcttctatgaggaggacaactctggtgtgacctggcaggccctgggggacttctca
cccactgacgtacacagacagtttgccatcgtgttcaaaactccaaagtaccgcgacctg
aacctgcagaagcccacgtctgtgttcgtccaactcaagaggaagtctgacaacgagacc
agcgaacccaaacccttcacctaccacccacagatcatagataaggaggaggtgcagagg
aagaggcagaagacgttaccaaacttccaggacttcagcgggcctcacggtggagctgca
ggaggaggcctgtacagaggaggagggcctggaggaggagggggaggaggatactaccag
aacttcacctcctttaactacggttcttctggagctgcaggaggcttctctggaggatac
tcagcgagcctgggctctggagctggggccaaacacgcttccagaagttcctcagcggat
gacggcgatccggacgacgactcctcctcgggggcggttctcaaaaacacaacccagaaa
cgagactccagactggggcagagcgaggagggcggggggggtcctcctgcggatcgcaca
gatgatgcagctcgtcgccaggtggaggcgctcttccagttctcggtctcaggaaacccg
gcctttctcctggccccgcagcgccacctactgtcagttcaggacgaggacggagacaca
ggtctgcacttggccgttctgcacagccagcaggaggcgctacagagtctgatccaggtc
ctgtcggttttctccacagaggaactgctcaatatgaggaaccatttataccagactcct
ttgcacctggcggtcctgacgcagcagaaggacgccgtagacactctcctattggccgga
gctgaccccgccctcacagatcgccacggcaacacggcgcttcacctggcgacggcgcag
gaagtgggagacatgacgtcgcacctgctgcagaggccccaggtcagggcgctcatgggg
gtcgcaaatactgcaggacagtgtccgctccacatggccgttttgtccaatcgtctgtcg
tcccttcggagcctactacagagcggcgccgacgtggagctgcaggagaggacgagcggc
aggacgcccctgcacctggcgaccgaggcggacaacgtctcactggccgggtgcctgctc
ctggagggaaatgcccgagtggacagttgtacgtttgacggttcgactccgctgcacgtg
gctgcaggtcgcggctcggctaaactcaccgctctgctcatggcggcaggagccgacccc
ctcagagaaaacctggagcctctgtacatgtgtgaggaagaggaggaggacgaaggatac
gtccccggaaccacccccctcaacatggccgccaacgcacaggttttagagcttcttaac
ggaaaagagtacgaaccaaaaccacctcagtaccccctcagccctcctcaaggagacttg
tgcagcctggagctctctctgaaacaggaagtgtgtcgcgctctggacactgagggattg
tgggaaacgttgtcccacggtttgggtttgggcattttgaacaacgccttcagactgagc
tcctgccccgccaaatccctcctggacagctacgaggtgtcggggggcacggtgaaggag
ttgatggccgctctgaagtctgtgggaggctgcactgctctgaacgtcctgcaggaggcg
cagcagctcagccccaccacagacacaccacaagactccacagagcgtctcccggagctg
ctccaggacctgaagctggacgtgcgcgaggacagtggactctgcgacagcggcgtggag
ctctctgtcgtctga
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