Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110171695
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Entry
110171695 CDS
T05002
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpec03016
]
110171695 (cdkal1)
Enzymes [BR:
bpec01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
110171695 (cdkal1)
Transfer RNA biogenesis [BR:
bpec03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
110171695 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
110171695
NCBI-ProteinID:
XP_020793119
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MPSACESLIEDIEDMVSSNDPTPQERQSARKSIIPRSRKKREPLINEEIQADSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPADADLWVLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILSHPRVYAFLHVPVQSASDSVLMDMKREYCVDDFRKVVDFLKERVPGVTIATDIICG
FPGETEEDFQETMELVKHYKFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSQLFH
SYNPYDHKVGERQHVLVTEESFDAQFYVAHNKYYEQVLVPKRSEFKGKMIEVDIYEAGKH
FLKGRPVEDSKPFTPSIVEPLQKGQVSGLSQEQMANGVHSPAAMSSSSSAGVSVSLFGCY
SVDRDALTKLGIGLALAGAILAFIVEKLY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggcctgtgaatctttgattgaagatattgaggacatggtttcctctaatgac
ccaacacctcaggagagacagtcagcccgtaagagcatcataccaaggtcccgaaagaag
agagagccactgatcaatgaagagattcaagcagacagtttaatacctggcactcaaaag
atatggatgaaaacttggggttgcagccacaacaattcagatggagaatacatggctgga
cagctagctgccagtggatacaaaatgacagatgatccagcagatgcagacttgtgggtg
ctcaacagttgtacagtgaaaaatccagcagaggatcacttcagaaactccatcaaaaag
gcccaagaacaacaaaagaaggtggtggtggcaggttgtgtaccccaagctcagccaaga
atggactacctcaagggactcagcatcataggggtccagcagattgatcgagtggtggaa
gtcgtagacgaggctgttaaaggacattcagttcgtctgctgggccagaaaaaagatgga
gggcgaagactgggaggggccagactagacctgcccaagatcaggaaaaaccctctcatt
gaaataatctccattaatacaggatgtctgaatgcgtgcacttattgtaagacgaaacat
gccagaggagacctagccagctaccccatagaagagctggtagagagggcaaggcagtca
tttcaggagggcgtgtgtgaaatttggctgaccagtgaagacacaggagcgtatggcagg
gacattggcacagatctgcccactctgctctggagattggtggaggagatccccgaagga
gccatgctgcgactgggcatgaccaaccctccgtacatactggaacacttagaggaaatg
gcgaagatcctgagtcacccgcgtgtgtatgcgttcctccatgtgcctgtgcagtcggcc
tcagacagtgttctgatggacatgaagagagagtactgcgttgacgacttcaggaaagtg
gtggacttcctcaaagaaagagttccaggtgtaaccattgccactgatatcatctgcggt
ttccccggagagactgaggaggactttcaggaaactatggagctggtgaagcactacaag
ttccccagcctcttcatcaaccagttctaccctcgacctgggacacctgccgctaaaatg
gagcaagtgcctgcacatgtgaaaaaacagcggacaaaagagctatctcaactgttccac
tcatacaacccttatgaccacaaggttggtgagaggcaacatgtgctggtgacagaggag
tcatttgatgcccagttctatgttgcgcacaacaaatactacgagcaggtgctggtgccc
aaaaggtcagagttcaaagggaagatgattgaggtggacatttacgaagcaggaaaacac
tttctgaaaggccgtccggtcgaggacagcaaacctttcactccgtccatcgtggagcca
cttcagaagggacaagtctctggtctctcacaggagcagatggccaatggcgtccacagt
cccgctgctatgtcttcgtcctcctctgctggtgtctccgtctcgctgtttggctgttac
agtgttgatcgggacgcactgacgaagctgggaattggccttgcgctggcaggcgccatt
ttggccttcattgtggagaaactgtactga
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