Alkalihalophilus pseudofirmus: BpOF4_13285
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Entry
BpOF4_13285 CDS
T01165
Symbol
comEB
Name
(GenBank) late competence operon required for DNA binding and uptake
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
bpf
Alkalihalophilus pseudofirmus
Pathway
bpf00240
Pyrimidine metabolism
bpf01100
Metabolic pathways
bpf01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
bpf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BpOF4_13285 (comEB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bpf02044
]
BpOF4_13285 (comEB)
Enzymes [BR:
bpf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
BpOF4_13285 (comEB)
Secretion system [BR:
bpf02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
BpOF4_13285 (comEB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
Csm1_N
Motif
Other DBs
NCBI-ProteinID:
ADC50708
UniProt:
D3FXJ7
LinkDB
All DBs
Position
1081061..1081630
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AA seq
189 aa
AA seq
DB search
MERISWDQYFMAQSHLLALRSACTRLMVGATIVREKRIIAGGYNGSVSGSDHCIDQGCYV
VDHHCIRTIHAEVNALLQCAKFGVPTEGAELYVTHFPCVHCTKSIIQAGIKKVFYASDYK
NHPYAVELFKEAGVEVSQVVLENPVLDIHQNEKQDLTETLLTKLKSLGMNEAEWEGLRAE
VDSLYPPKS
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtatatcatgggatcaatattttatggctcaaagtcatttattagcattaaga
agcgcgtgcacccgcctaatggtcggtgccacgattgtaagagaaaaacggattattgca
ggggggtataatggatcggttagtggcagtgatcattgcattgatcaggggtgttatgtt
gtagatcatcattgtatccggacaattcacgcagaagtaaatgcattattgcaatgtgca
aaattcggcgtgccgacagagggagcggagctttatgttacacatttcccttgtgtgcat
tgtacgaaatccattatccaggctgggattaaaaaagtattttatgcaagtgattataag
aaccatccatatgccgttgagctttttaaagaggctggtgtagaagtatcacaagtggtc
cttgaaaaccctgttcttgatattcaccaaaatgaaaaacaggatttaacagaaacattg
ttaaccaaattaaaaagtcttggcatgaatgaggctgaatgggaaggtctacgcgccgaa
gtggattctctatatccgcctaaatcataa
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