Bathycoccus prasinos: Bathy05g00030
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Entry
Bathy05g00030 CDS
T03089
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
bpg
Bathycoccus prasinos
Pathway
bpg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Bathy05g00030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpg03400
]
Bathy05g00030
DNA repair and recombination proteins [BR:
bpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Bathy05g00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
AAA
AAA_10
IlvC
Motif
Other DBs
NCBI-GeneID:
19015507
NCBI-ProteinID:
XP_007513241
UniProt:
K8EFN1
LinkDB
All DBs
Position
5:3980..7936
Genome browser
AA seq
1318 aa
AA seq
DB search
MKFDRNKDGGEDEEDRVPAAEAARRRFFPPPGKTMMNEENALRTFREGLGFKTATKKVKK
QKRQSFHSASFATAHTQPMQAPTFANSPAKKASSSSFLTRTPGKKHRASDAALSFRTTTT
TTQKIPKPNNFKSVSATTSTDTTTSSLTETVVMTHPDVLQRREQRDDADEMLQFLNENKE
NEKTRRMKKRTLLDALQTGGAGDEEAPDKNNTKPPDWIKVQRDSRNVARGEKLVANELMR
AMQLDTEVNGELIPDASSLFIPTGALEQLPPFARWYWSVKSQMMDCLVCVQVGRFFNLFQ
NDADTGETVGLRPSGKNRGFMRKVGFPYVVFDDWCAKLIAHGYCIAKCVEGKEIDTKRKL
CERKITEIITPGLNKGFVDDTNQESWVCTLAQEGDDFLGVCLIDADKGNVKFGSFKISID
SNKNSINESLVNNGDDTNDDTSAAFAKLISILTQARPKEIIISLRGPNSIRRNVKRAIQR
HYESVSAGAFASERVHDQHDDVDDYDESYASHASLRNNPVVRVIERGCDPLPEISIDDVK
RAIRQFAGEAEFETDTDTRRAVEGAGNAGLVALAFGIRFCAWAGQCESIFKSAKYGSLAS
LVNIDFDDVQNHDNNNSGPLRQRKTMLEFHGNALKELGVTDGGKKSLIGLLSRDCITPHG
KRRVRDMVFSPLVQISDITTRQDTIQFLLKDADEQRAATANEHNYETREYLKRKLPRGDC
ERSLTKCMNLAQCCATMCAANANVLIEGTDPSAQTQCRDAVITLTAATVGGAPNSDELYG
NAMESLNEGETLDDALVAFWELNQSRLDGFSKAVECLMILAKSLKGLAAFRREQRNVPII
IDKAIALGETACPLLEDLREALRVDKINDEENARRKIRIVTPDKRAFKTYARADADAVEA
DNERNIQRQQKQQRRDFDVEQFGMMMDDEDDDVENQMLEDERAAYLFDRADRAGARAFTT
VIAQFATHKCLWRALINAGADIDALNSFARLKAEDTANDFCVPRFLSLNKSDGTPIVSLT
NFWHPLLDASQRNIVKNDAQFGGSCCDNDGGQPRECPRFVLLSGPNMGGKSTLARAVGLT
IVLAQVGAHVPASECVLTPIHQLVVRCGTLRDDLRAGVSTFLAETQACATAMKVANKNTT
SLMIMDEIGQGTSTSDGYAIASAVARALMKSNTAITLFTTHFHDLHENLASSSALRFASC
HMSSEINEKTRDVVRYNYKLCDGSAPFGSCGLSVARLAGLDDTILQKSQRVARSLQTTRV
LAVNTKRTKNVILSNEALSAFKQLLRDPGVNGEHIANEREWCIEFYQYWKYVERLLAL
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgaccgcaataaagacggcggagaagacgaggaagatcgcgtgccggcggcg
gaagcagcgcgacgtcgcttctttccgccgccaggtaagacgatgatgaacgaagagaac
gccttgagaacctttcgagaaggtttaggtttcaaaacggcgacaaagaaggtaaagaaa
caaaaacgacaaagttttcacagcgcttctttcgccacggcgcacacgcaaccaatgcaa
gcgcctacctttgcaaactctcctgcgaagaaagcgtcgtcttcatcatttttgacgcga
acgcctggtaaaaaacatcgcgcgtccgatgcggcgctttcgtttcgaacgacgacgacg
acgacgcaaaaaataccaaaacctaataattttaaaagtgtttcggcaacgacgtcgacg
gacacgacgacaagttcgttaacagaaactgtcgtgatgacccatccggacgtgctccaa
cggcgtgaacaacgcgatgatgcagacgaaatgcttcaatttcttaacgaaaacaaggag
aacgaaaagacgcgtcgtatgaagaagcgcacgctcctggacgctctgcaaacaggagga
gcaggagacgaagaagcgcctgataaaaacaataccaagcctcccgactggatcaaggtc
cagcgcgattcgagaaatgtcgcgcgcggagagaaattagtcgcgaacgagttgatgcgc
gcgatgcagttagacacggaagtaaacggtgagttgattccggacgcctcgtcgcttttt
attccaaccggcgctttggaacaactcccgccgttcgcgcgttggtattggagcgtcaaa
tcgcaaatgatggactgcttagtgtgcgttcaagtcggtcgcttctttaatctttttcag
aacgatgctgatacgggcgaaacggttggtttgcgaccatccgggaagaatcgcggtttc
atgcgcaaagttggcttcccgtacgtggttttcgacgactggtgcgcgaagctcatcgct
catggatattgcatcgcgaaatgcgtcgaagggaaagagattgacaccaagaggaaactc
tgtgaacgaaaaataacagagattatcacacctggtttgaataaaggatttgttgacgat
acgaaccaagagtcgtgggtttgcacgctcgctcaagagggcgacgacttcctcggcgtt
tgcttaatcgacgccgataaaggaaacgtcaaattcggttcgttcaaaatttcaatcgac
agtaacaaaaacagtatcaacgaatcactcgtaaacaacggcgacgataccaacgatgat
acatccgctgcttttgcgaagctgatctcgattcttacgcaagctcgtccgaaagaaatt
attatttctttgagagggccaaactccattcgacgcaacgtgaaacgcgcaatacaacga
cactacgagagtgtgagcgccggtgcttttgcatcagaacgagtacacgaccaacacgac
gatgtggatgattacgacgagagctatgcgagtcacgcgtcgttacgaaacaatccagtc
gtccgagtcatcgagagaggctgcgatcctctcccggagatatctatcgatgatgtgaag
agggctattcgtcaatttgccggtgaagctgagttcgaaacagacacggatacgcgaaga
gcagtggaaggcgcaggaaatgctggactcgttgcgctggcgttcggtattcgattctgt
gcctgggcaggtcagtgtgaatcaatcttcaagtccgctaaatatggttccctagcctcg
ctcgtcaacatcgatttcgacgacgtccaaaaccatgataacaacaacagcggtccgttg
cgtcaacgtaaaacaatgctcgaatttcacggcaacgcgttgaaagagctcggcgtaacc
gatggaggtaaaaaatctttgattggtttactttctcgggattgtattacgccgcatggt
aagcgacgggtgcgcgatatggttttcagccctctcgtacaaatctcggatatcacgacc
agacaggatacaatacagttcctacttaaagatgcagacgagcaacgcgctgccacggcg
aacgaacacaactatgaaacgcgcgaatacttgaaacgaaagctcccgcgtggtgattgt
gaacgctcattgacgaagtgtatgaacctagcgcaatgttgcgctacaatgtgcgcggcg
aatgcgaacgtattgatcgagggcaccgatccaagcgctcagacgcaatgccgcgatgct
gtcatcacgctgaccgcggcaacagttgggggcgctccaaactccgacgagctttacgga
aacgccatggaaagcctcaacgaaggtgaaactctcgacgacgctttggttgcgttttgg
gagttgaaccaatcgcgcctcgatggcttctcgaaagcagtcgaatgcttgatgatttta
gccaagtctttgaaaggattagcggcattccgaagagaacaaagaaacgttcctataata
atcgacaaagcaattgcactcggcgaaaccgcgtgtccgcttctcgaagacttgcgcgaa
gcgctcagggtggataaaatcaacgacgaagaaaacgcgcgcagaaaaattcgaatcgtg
acacctgataaaagagcatttaaaacgtacgcccgagccgacgctgacgcagtagaagcg
gacaacgaaaggaacatacagcgtcaacagaagcaacaacgtcgtgatttcgacgtggaa
cagttcggaatgatgatggacgatgaagacgacgacgtggaaaaccaaatgctggaagat
gaacgcgctgcgtatttgtttgaccgcgccgaccgtgctggagcccgagcttttacgacg
gttattgcgcaatttgcgacgcacaagtgcttatggcgtgcactcattaacgctggtgct
gatattgatgccttgaactcattcgctcgtctaaaagccgaagatacggcgaatgatttc
tgcgtaccgaggtttctgagtttgaacaagagcgatggaacacccatcgtttcgctgacg
aatttctggcatccgctcttggatgcatcgcaacgaaatattgtgaagaacgacgcgcaa
ttcggtggaagctgttgcgataacgatggcggtcagccgagggaatgccctaggtttgtt
ctcttgtctggaccaaacatgggcgggaaaagcactctcgcgcgagcagttggacttacc
atcgttctcgcgcaagtaggagcgcacgtgcctgcatccgagtgcgtattaacgcccatt
caccaactcgtggtgagatgtggaacgcttagagacgacttacgagctggcgtttccact
tttctcgcggaaacgcaggcgtgcgcaacagcgatgaaggtggcgaacaagaatacaact
tcgcttatgattatggatgaaattggccaaggtacgagtacttctgacgggtacgccata
gcatcagccgttgctcgagcgttgatgaaatcaaacacggcaatcactctgtttacgacg
cattttcacgacttacatgaaaatttagcctcctcgagcgcgttgcgcttcgcgtcgtgc
cacatgtcgagcgaaataaacgaaaagacgcgcgatgtcgtgcggtataattacaaactg
tgcgacggttctgccccgtttggttcgtgcggactttctgtcgccagacttgcaggcctg
gatgataccatactccaaaagagccaacgcgtagcgcgttcattgcagacgaccagggtg
ctcgccgtgaacacgaagcgcacgaaaaacgtcattttatcaaacgaggcgctgagcgcg
tttaagcagctccttcgtgatccaggggtgaacggggagcacatcgcgaatgaacgtgaa
tggtgcatcgaattctatcagtattggaagtatgttgaaagacttctagcgctctga
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