KEGG   Bathycoccus prasinos: Bathy14g02490
Entry
Bathy14g02490     CDS       T03089                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03020  RNA polymerase
bpg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Bathy14g02490
  09124 Replication and repair
   03420 Nucleotide excision repair
    Bathy14g02490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpg03021]
    Bathy14g02490
   03400 DNA repair and recombination proteins [BR:bpg03400]
    Bathy14g02490
Transcription machinery [BR:bpg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Bathy14g02490
DNA repair and recombination proteins [BR:bpg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Bathy14g02490
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_Tnp_IS1595 DUF6510 Rhodanese_C RUBY_RBDX zinc_ribbon_4
Other DBs
NCBI-GeneID: 19011840
NCBI-ProteinID: XP_007509253
UniProt: K8F4F7
LinkDB
Position
14:453350..453733
AA seq 127 aa
MDSGREDEGMVKLRFCPNSNDLLYPKEDRERQKLVYVCRNCDYLIDADSDCVYRNSIAHT
SDEVTTVIQDVRTDPTLPRSNDARCSKCGHREAVFFSLTTTDGMSLFFQCVSCAYKWKDT
GSAVEES
NT seq 384 nt   +upstreamnt  +downstreamnt
atggattcaggaagagaagatgagggcatggtgaagttgcgcttctgtcctaacagcaat
gatttactgtatcccaaggaagatcgagaaaggcaaaagttagtttatgtctgtagaaac
tgcgactatttgatagatgccgacagtgactgtgtatatcgtaactcaatcgcccataca
tcagatgaagttacgactgtaattcaagatgttcgcacggacccgactctcccgagatct
aacgatgctcgttgttctaaatgtggtcacagagaggcagtatttttctcgttaacaaca
acagatggtatgtccttattttttcagtgtgtttcgtgtgcatacaagtggaaggataca
ggaagtgccgttgaagaaagctaa

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