Paraburkholderia phymatum: Bphy_0996
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Entry
Bphy_0996 CDS
T00704
Name
(GenBank) peptidase dimerisation domain protein
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00300
Lysine biosynthesis
bph01100
Metabolic pathways
bph01120
Microbial metabolism in diverse environments
bph01230
Biosynthesis of amino acids
Module
bph_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Bphy_0996
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bph01002
]
Bphy_0996
Enzymes [BR:
bph01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Bphy_0996
Peptidases and inhibitors [BR:
bph01002
]
Metallo peptidases
Family M20
Bphy_0996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ACC70185
UniProt:
B2JGK0
LinkDB
All DBs
Position
1:complement(1115827..1117005)
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AA seq
392 aa
AA seq
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MTDAVDTASIVELLTALVRLPSRGGIDACTPVLECVEAWFAARGVGTRRLLCADGEPLAL
YAEIRGASPRPHYVLNATLDTAGFGDESTWTWPPLSAQVVDGWLHGRGSADSKAAVAIFA
HLAVAFARRADSFAGTLGVLFDLDEHTGRFGGARAFFDETSAPKPDGVFIGYPGIDRIVV
GARGFMRAKLVVRGVAAHSGASSTRGLNAATRGARLAAALSDTSLPFDHAFGRAAQLTVT
GIRAGDGTFTRVPERCELDIDCRLTPDFDAAHAQRVIEGMVREQDATYDASLATSIEWLP
GWPAYRMTDSHPLASALYHAANDELGAKRACVVAGPSNIGNYLASLGIPALCGFGVQCAG
IHAADERIELASIAPVYRIYERALLALLAAAN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgcggtcgacacggcatccatcgtcgaactgttgacggcgctcgtgcgcctg
ccgagccgcggcggcatcgatgcgtgcacgcccgtgctcgaatgcgtcgaagcgtggttc
gccgcacgcggggtcggcacgcgccgcctgctttgcgccgatggcgaaccgctcgcgctc
tacgccgaaatccgcggcgcctcgccgcgcccgcattacgtgctcaacgcgacgctcgac
acggccggcttcggcgacgaatcgacctggacctggccgccgctcagcgcgcaggtggtc
gacggctggctgcatggacgcggcagcgccgacagcaaggcggccgtcgcgatcttcgcg
cacctcgccgtcgcgttcgcgcggcgcgccgattcattcgcgggtacgctcggcgtgctg
ttcgatctcgacgagcacacgggccgtttcgggggcgcccgcgcgttcttcgacgaaacg
agcgcgcccaaacccgacggcgtattcatcggctatccgggtatcgaccgcatcgtggtc
ggcgcgcgcggattcatgcgcgcgaaactggtcgtgcgcggcgtcgcggcgcattcgggc
gcgagcagcacgcgcggactcaacgcggcgacacgcggcgcgcgcctcgctgcggcgttg
agcgacacgtcactgcccttcgatcacgccttcggacgcgctgcccaactcaccgtcacg
ggcattcgcgcgggcgacggcaccttcacccgcgttcccgaacgctgcgaactcgacatc
gattgccgcctcacgccggacttcgatgccgcgcacgctcagcgcgtgatcgaaggcatg
gttcgcgaacaggatgcgacctacgacgcgtcgctcgcgacgtcgatcgaatggctaccc
ggctggcctgcgtatcgcatgacggattcacatccgctcgcgagtgcgctgtatcacgcg
gcaaacgacgaactgggcgcgaaacgggcgtgcgtcgtcgccgggccgtcgaacatcggc
aactacctcgcgtcgctgggcattcccgcgctgtgcggcttcggcgtgcaatgcgccggc
atccacgcggccgacgaacgcatcgaactcgcttccattgcgcccgtctaccgcatttac
gaacgtgcgctgctcgcgttgcttgccgccgcgaactga
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