Paraburkholderia phymatum: Bphy_5916
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Entry
Bphy_5916 CDS
T00704
Name
(GenBank) glycine cleavage T protein (aminomethyl transferase)
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00260
Glycine, serine and threonine metabolism
bph01100
Metabolic pathways
Module
bph_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphy_5916
Enzymes [BR:
bph01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Bphy_5916
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Bphy_5916
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
GCV_T_C
Fer2_4
Pyr_redox_2
Pyr_redox_3
FAD_oxidored
FAD_binding_2
NAD_binding_8
HI0933_like
GIDA
Thi4
DAO
FAD_binding_3
Pyr_redox
AlaDh_PNT_C
POPLD
3HCDH_N
UDPG_MGDP_dh_N
Lycopene_cycl
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ACC74980
UniProt:
B2JVK3
LinkDB
All DBs
Position
pBPHY01:433939..436905
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AA seq
988 aa
AA seq
DB search
MRLTPHRGEWIERNTRIEFSYEGRPYSGLAGDTITSALWASDVRVLGRSFKYHRPRGVLS
LANHDVNVMLQDGQRLNVRADVTALTPGGKWHSVNTFGGVEADRARIVGKLSAFLPVGFY
YKAFYSKRWFPRWERMFRAMTGLGTVDFNAPHIRTPKRYGFCDVLVIGAGPSGLSAALAA
AQAGADVVVVDENARVGGSGGYQLGGDEQRFDVSRTLETHVLGHPRIRVMTNTLAAAYYA
DLWVPLVDSTRITKMRAKAVIVASGAFEQPAVFRNNDLPGVMLASAAQRLAYRYAVAPGK
RAVVLAANADGYRAALDMLARGIEVVAVVDLRASHASGDIERELRTKGVDVMASSCVVEA
VADKTGGRLTGVRVGAFSTQSSLRDSTANTRLIECDTLLMSVGWAPAANLLYQAGTKMQF
DHAVEQFVPEQLPPGVFACGRVNGVYTLGHKLQDGERAGLQAAAHCGFGDGRTAGAMQAR
IAEHESPSHPWPIVGHASGKNFVDFDEDLQLKDFENAVQEGFDNIELLKRFSTNGMGPSQ
GKHSNMNGLRVLARLTGKEPQQVGTTTARPFFHPVPMSHLAGRGFNPERRTPLHAQHQLL
NAVWMAAGVWQRPEYYAVAGKARAACIEEEALAVRNGVGIIDVGTLGKIEVRGPQAAEFL
ERVYVSKYAGLKAGMTRYAVMCDESGVVIDDGVIARLADDHFYFTTTTSGAAAIYRELSR
LNTIWQLDCGIVNVTGAFAAVNLAGPASRAVLSKLVDLDLSSAAFPYLGVRVTGVTLGQN
RVPARLMRVGFVGEWGYEIHIPADYGAALWRALLETGNPYGVRPFGVEAQRLLRLEKGHV
IVSQDTDGLTTPRDAGMAWAVKMDKPFFVGKRSLQIIDQTPAKQCLVGFALDAGVRDSSL
RECHLVIERGEIAGRVTSVAWSATLQKTIGLAFVRPSQAEPGTRITFRANGGRMVSATVV
PTPFYDPESERQKDAVTITAAAPRKETA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgactcctcatcgcggcgaatggatcgagcgcaacacgcgcatcgagttctca
tacgaaggcaggccatactcgggcctcgccggcgacacgatcaccagcgcactgtgggct
tccgacgtgcgcgtgcttggccgcagcttcaagtatcaccggccgcgcggcgtgctgtcg
cttgccaatcacgacgtcaacgtgatgcttcaggacggccagcggctgaacgtgcgcgcc
gacgtgacagcactgacgccgggcggcaagtggcattccgtcaacacgttcggcggtgtc
gaggcggatcgcgcgcgcatcgtcggcaagctttcggcgttccttcctgtcggcttctat
tacaaggcgttttatagcaagcgctggttcccgcgctgggaacgcatgttccgcgcgatg
acgggcctcggcacggtcgatttcaatgcgccgcatatccgcacgccgaagcgctacggc
ttttgcgacgtgctcgtgatcggcgcagggccgtcgggcctgtcggcggcgctggcggcc
gcgcaagcgggtgcggatgtcgtcgtcgtcgacgagaacgcacgcgtcggcggcagcggc
ggctatcagctgggcggcgacgagcagcgcttcgacgtgagccgcacgctggaaacgcac
gtgctcgggcatccgcgcatccgcgtgatgacgaacacgctcgcggcagcctattacgcc
gatctgtgggtgccgctggtggactcgacgcgcatcaccaagatgcgcgcgaaagcggtg
atcgtcgcgagcggcgcgttcgagcagcccgccgtgtttcgcaacaacgatctgccgggc
gtgatgctggcgtcggcggcgcaacggcttgcttatcgctatgccgtcgcgcccggcaag
cgcgcggtggtgctggccgcgaatgccgacggctatcgcgcggcgctcgacatgctcgcg
cgcggcatcgaagtagtggccgtggtggatttgcgcgcgtcgcatgcgagcggcgatatc
gaacgcgagctcaggacgaagggcgtcgatgtaatggcatcgagctgcgtcgtcgaggcc
gtagcggacaaaacaggcggacggctgacgggcgtgcgcgtcggtgccttctcgacacaa
agcagcttgcgcgattcgacggcaaacacgcgtctgatcgaatgcgacacgctgctgatg
agcgtcggctgggcacctgctgcgaatctgctgtatcaggcgggcacgaaaatgcagttc
gatcacgcggtagaacagttcgtgcccgagcaattgccgcccggcgtgttcgcttgcggc
cgcgtgaatggcgtgtacacgctcggccacaagctgcaggacggcgagcgcgccggcctg
caggccgcggcgcactgcggtttcggcgacggcaggacggcgggcgcgatgcaggcgcga
atcgcggaacacgaatcgccgtcgcatccgtggccgatcgtcggccatgcgtcgggcaag
aacttcgtcgatttcgacgaagacctgcagctgaaggatttcgaaaatgccgtgcaggaa
ggcttcgacaacatcgaactgctgaagcgtttctcgaccaacggcatgggtccgagccag
ggcaagcactcgaacatgaacggcttgcgcgttcttgcgcggctgacgggcaaggagcct
cagcaagtcggcacgacgacggcgcggccattcttccaccccgtgccgatgtcgcatctc
gccggacgcggcttcaatccggaacggcgcacgccgcttcatgcgcagcatcagttgctc
aatgcagtgtggatggcggctggcgtctggcagcgtccggagtattacgccgtcgcgggc
aaggcgcgggcggcctgcatcgaagaagaagcgctcgccgtgcgcaacggcgtgggcatc
atcgatgtcggcacactcggcaagatcgaagtgcgcggaccgcaggccgccgagtttctc
gaacgcgtgtacgtgtcgaagtacgcggggttgaaagcgggcatgacgcgctacgccgtg
atgtgcgacgagtccggtgtcgtgatcgacgacggcgtgatcgcgcgtctcgccgacgac
cacttctatttcacgaccacgacctcgggtgcggctgccatctatcgcgagctgtcccgc
ctcaacacgatctggcagctcgactgcggcatcgtcaacgtgacgggcgcgttcgcagcc
gtgaatctcgccgggccggcgtcgcgcgcggtgctcagcaagctcgtcgatctcgatctg
tcgtcggcggccttcccttatctgggcgtgcgcgtgacgggcgtcacgctcggtcagaac
cgcgtgcctgcgcgtctgatgcgagtgggtttcgtcggcgaatggggctacgaaatccac
atcccggccgactatggcgcggccctctggcgcgcgctgctcgaaacgggcaacccatat
ggcgtgcgtccgttcggcgtcgaagcgcagcgtctgctgcggctggaaaaaggtcacgtg
atcgtgagccaggacacggacggcctgacgacgccgcgcgacgcgggcatggcatgggcc
gtgaagatggacaagccgtttttcgtcggcaagcgcagtttgcagatcatcgatcagacg
ccggccaagcagtgtctcgtcggcttcgcgctcgatgcgggcgtgcgcgacagcagtctg
cgcgagtgtcatctggtgatcgaacgcggcgagattgcggggcgggtcacgagcgtcgcg
tggagcgcgactctgcaaaagaccattgggctcgcgtttgtgcggccgtctcaagctgag
cccggcacgcgcatcacattccgtgcgaacggcggccgcatggtgtccgcgaccgtcgtg
ccgacaccgttctatgaccctgagagcgagcgtcagaaagacgccgtaacgataacagca
gctgcgccgaggaaggagacagcatga
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