Burkholderia pseudomallei NCTC 13179: BBK_3978
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Entry
BBK_3978 CDS
T02894
Symbol
soxB
Name
(GenBank) subunit beta of sarcosine oxidase
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk00260
Glycine, serine and threonine metabolism
bpk01100
Metabolic pathways
Module
bpk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BBK_3978 (soxB)
Enzymes [BR:
bpk01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BBK_3978 (soxB)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BBK_3978 (soxB)
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Ortholog
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GFIT
Motif
Pfam:
DAO
NAD_binding_8
Thi4
FAD_binding_2
Pyr_redox_3
Pyr_redox_2
FAD_oxidored
FAD_binding_3
Rhodanese
NAD_binding_9
MCRA
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
AGZ31336
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All DBs
Position
2:complement(637772..639016)
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AA seq
414 aa
AA seq
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MSHYSIFSLFRNGLSYHENWEKQWKSPEPKREYDVVIVGGGGHGLATAYYLAKEHGVTNV
AILEKGWIGGGNTARNTTIVRSNYLWDESAGLYEKAMKLWEGLAQDLNYNVMFSQRGVMN
LAHTLQDVRDTERRVNANRLNGVDAEFLTPAQIKEIEPTINLNSRYPVLGASIQRRGGVA
RHDAVAWGFARGADRAGVDIIQNCQVTGIRREGGAVVGVDTVKGFIKAKKVAVVAAGNTT
TLADMAGVRLPLESHPLQALVSEPIKPVVNTVVMSNAVHAYISQSDKGDLVIGAGIDQYT
GFGQRGSFQIIEGTLEAIVEMFPVFSRVRMNRQWGGIVDVSPDACPIISKTDVKGLYFNC
GWGTGGFKATPGSGWVFAHTIARDEPHALNAPFALDRFYTGHLIDEHGAAAVAH
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagccactactcgatattcagcctgtttcgcaacggcctgtcgtatcacgagaactgg
gaaaagcagtggaagagcccggagccgaagcgcgagtacgacgtcgtgatcgtcggcggc
ggcgggcatgggctcgccaccgcgtactacctcgcgaaggagcatggcgtgacgaacgtc
gcgattctcgagaagggctggatcggcggcggcaacaccgcgcgcaacacgacgatcgtc
cgctcgaactacctgtgggacgaatccgccgggctctacgagaaggcgatgaagctgtgg
gaagggctcgcgcaggacttgaactacaacgtgatgttcagccagcgtggcgtgatgaac
ctcgcgcatacgctgcaggacgtgcgcgacaccgagcgccgcgtgaacgcgaaccggctg
aacggcgtcgacgccgagttcctcacgcccgcgcagatcaaggagatcgagccgacgatc
aacctgaacagccgctacccggtgcttggcgcgtcgatccagcggcgcggcggcgtggcg
cggcacgacgcggtggcctggggcttcgcgcgcggcgcggaccgcgcgggcgtcgacatc
atccagaactgccaggtgacgggcatccgccgcgagggcggggcggtggtcggcgtcgat
acggtcaagggcttcatcaaggcgaagaaggtcgcggtggtcgcggcgggcaacacgacg
acgctcgccgacatggccggcgtgcggctgccgctcgaaagccatccgctgcaggcgctc
gtgtccgagccgatcaagccggtcgtcaacacggtcgtgatgtcgaacgcggtgcatgcg
tacatcagccagtccgacaagggcgacctcgtgatcggcgcgggtatcgaccaatacacg
ggcttcggccagcgcggcagcttccagatcatcgaaggcacgctggaggcgatcgtcgag
atgttcccggtgttctcgcgcgtgcggatgaaccgccagtggggcggcatcgtcgacgtg
tcgccggacgcgtgcccgatcatcagcaagaccgacgtgaagggcctgtatttcaactgc
ggctggggcacgggcggcttcaaggcgacgccgggctcgggctgggtgttcgcgcatacg
atcgcgcgcgacgagccgcacgcgctgaacgcgccgttcgcgctcgaccggttctacacc
ggccacctgatcgacgagcacggcgcggccgccgtcgcgcattga
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