Burkholderia pseudomallei 1710b: BURPS1710b_A0393
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Entry
BURPS1710b_A0393 CDS
T00289
Symbol
soxA
Name
(GenBank) putative sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bpm
Burkholderia pseudomallei 1710b
Pathway
bpm00260
Glycine, serine and threonine metabolism
bpm01100
Metabolic pathways
Module
bpm_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BURPS1710b_A0393 (soxA)
Enzymes [BR:
bpm01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BURPS1710b_A0393 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BURPS1710b_A0393 (soxA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
FAD_binding_2
NAD_binding_8
HI0933_like
DAO
Pyr_redox
FAD_binding_3
Thi4
GIDA
AlaDh_PNT_C
NAD_binding_7
Lycopene_cycl
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
ABA52546
UniProt:
Q3JLK1
LinkDB
All DBs
Position
II:complement(550189..553197)
Genome browser
AA seq
1002 aa
AA seq
DB search
MSQKDRLGAGGRINRAQPLTFTFNGRTYQGFQGDTLASALLANGVHFVARSFKYHRPRGI
VTAGVDEPNAVVQLETGAYTVPNARATEVELYQGLVATSVNAKPSLEHDRMAVMQKLARF
LPAGFYYKTFMWPRNLWPKYEEKIREAAGLGKAPDTLDADRYDKCYAHCDVLVVGGGPTG
LAAAHAAAVNGARVILVDDQRELGGSLLACRAEIDGKPALQWVEKIEAELAKLPDMSILT
RSTAFGYQDHNLVTVVQRLTDHLPVSMRKGTREMIWKVRAKRVILATGAHERPLVFGNND
LPGVMTASAVSAYIHRYGVLPGRVAVVATNNDRGYQCALDLKACGAKVTVVDARASTRGA
LPAVAKRHGITVMSGAAVSAAAGKLRVASVDVVSYANGRSGGKIATLPCDLVAMSGGFSP
VLHLFAQSGGKAHWNDDKACFVPGKPVQAEASVGAAAGEFELARALRLALDAGVAAAKSA
GFAAERPPVPKLAEAVEDALLPLWLASGAEAAVRGPKQFVDFQNDVGAADILLAAREGFE
SVEHVKRYTAMGFGTDQGKLGNINGMAILAQALGKTIPETGTTTFRPNYTPVSFGAFAGR
ELGDFLDPIRKTCVHEWHVEHGAMFEDVGNWKRPWYFPRNGEDLHAAVKRECLAVRNGVG
MLDASTLGKIDIQGPDAVKLLNWVYTNPWNKLEVGKCRYGLMLDENGMVFDDGVTVRLGD
QHFMMTTTTGGAARVLTWLERWLQTEWPDMKVRLSSVTDHWATFAVVGPKSRRVVQKVCK
DIDFANDAFPFMSYRDGTVAGVKSRVMRISFSGELAYEVNVPANAGRAVWEALMDAGAEF
DITPYGTETMHVLRAEKGYIIVGQDTDGSITPFDLGMGGLVAKSKDFLGRRSLTRADTAK
SGRKQFVGLLTDDAQSVLPEGGQIVELDAAARADGTTPMLGHVTSSYYSPILNRSIALAV
VKGGLSRMGERVAVSLANGRRVAATISSPVFYDTEGVRQHVE
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgactcggcgcaggcgggcgcatcaaccgcgcacagccgctcacc
ttcacgttcaacggccgcacgtatcagggcttccagggcgacacgctcgcgtctgcgctg
ctcgccaacggcgtgcacttcgtcgcgcgcagcttcaagtaccaccgtccgcgcgggatc
gtgacggcgggcgtcgacgagccgaacgccgtcgtgcagctcgaaaccggcgcgtacacg
gtgccgaacgcgcgcgcgaccgaggtcgagctgtatcaggggctcgtcgcgacgagcgtg
aacgcgaagccgtcgctcgagcacgaccggatggcggtgatgcagaagctcgcgcgtttc
ctgccggcgggcttctactacaagacgttcatgtggccgcgcaatctgtggccgaagtac
gaggagaagatccgcgaggcggccggcctcggcaaggcgcccgacacgctcgacgccgac
cgctacgacaagtgctacgcgcactgcgacgtgctcgtcgtcggcggcggcccgacgggg
ctcgcggccgcgcatgcggcggccgtcaacggcgcgcgcgtgatcctcgtcgacgatcag
cgcgagctgggcggcagcctgctcgcgtgccgcgcggagatcgacggcaagccggcgctg
caatgggtcgagaagatcgaggcggagctcgcgaagctgcccgacatgagcatcctcacg
cgcagcaccgcgttcggctatcaggatcacaacctcgtgaccgtcgtgcagcggctcacc
gatcatctgccggtgtcgatgcgcaagggcacgcgcgagatgatctggaaggtgcgcgcc
aagcgcgtgatcctcgccacgggcgcgcacgagcggccgctcgtgttcggcaataacgat
ctgccgggcgtgatgaccgcgtcggccgtgtcggcgtacatccatcgctacggtgtgctg
ccggggcgcgtcgcggtcgtcgcgacgaacaacgatcgcggctatcagtgcgcgctcgat
ctgaaggcgtgcggcgcgaaggtgacggtcgtcgatgcgcgcgcgtcgacgcgcggcgca
ttgcccgcggtcgccaagcgccacggcatcacggtgatgagcggcgcggccgtgtcggct
gcggcgggcaagctgcgcgtcgcgtcggtcgatgtcgtctcctatgccaatggccgctcg
ggcggcaagatcgcgacgctgccgtgcgatctggtcgcgatgtcgggcggcttcagcccg
gtgctgcacctgttcgcgcaatcgggcggcaaggcgcactggaacgacgacaaggcctgc
ttcgtgcccggcaagccggtgcaggcggaagcgagcgtcggcgcggcggccggcgagttc
gagctcgcgcgcgcgctgcggctcgcgctcgacgcgggcgtcgccgcggcgaaatcggcg
ggctttgccgccgagcgtccgcccgtgccgaagctcgccgaggcggtggaggacgcgctg
ctgccgttgtggctcgcgagcggcgcagaagcggcggttcgcggtccgaagcagttcgtc
gatttccagaacgacgtcggcgcggccgacatcctgctcgccgcgcgcgaaggtttcgaa
tcggtcgagcacgtgaagcgctacacggcgatgggcttcggcaccgatcagggcaagctc
ggcaacatcaacgggatggcgatcctcgcgcaggcgctcggcaagacgattccggagacg
ggcacgacgacgttccgcccgaactacacgccggtgtcgttcggcgcgttcgcgggccgc
gagctcggcgatttcctcgacccgatccgcaagacctgcgttcacgaatggcatgtcgag
cacggcgcgatgttcgaggacgtcggcaactggaagcggccgtggtacttcccgcgcaac
ggcgaggatctgcacgcggcggtcaagcgcgagtgcctcgcggtgcgcaacggcgtcggc
atgctcgatgcgtcgacgctcggcaagatcgatatccagggcccggacgcggtgaagctg
ctgaactgggtatacacgaacccgtggaacaagctcgaggtcggcaagtgccgctacggg
ctgatgctcgacgagaacggcatggtgttcgacgacggcgtgaccgtgcgcctgggcgac
cagcacttcatgatgacgaccaccacgggcggcgccgcgcgcgtgctcacgtggctcgag
cgctggctgcagacggaatggccggacatgaaggtgcgcctttcgtccgtcaccgatcac
tgggcgacgttcgcggtggtcggcccgaagagccgccgggtcgtgcagaaggtgtgcaag
gacatcgacttcgcgaacgacgcgttcccgttcatgagctatcgcgacggcacggtcgcc
ggcgtgaagtcgcgcgtgatgcgcatcagcttctcgggcgagctcgcgtacgaagtgaac
gtgccggcgaacgcgggccgcgcggtatgggaagcgctgatggacgcgggcgcggagttc
gacatcacgccgtacggcaccgagacgatgcacgtgctgcgcgcggagaagggctacatc
atcgtcggtcaggataccgacggatcgatcacgccgttcgatctcggcatgggcgggctc
gtcgcgaaatcgaaggatttcctcggccgccgctcgctcacgcgcgccgataccgcgaag
agcggccgcaagcagttcgtcggcctgctgaccgacgacgcgcagtctgttttgcccgaa
ggcggccagatcgtcgagctcgatgcggccgcgcgtgcggacggcacgacgccgatgctc
ggtcacgtgacgtcgagctattacagtccgatcctgaaccgctcgatcgcgctcgcggtc
gtgaagggcggattgagccggatgggcgagcgcgtcgcggtctcgctcgcgaacgggcgg
cgtgtcgccgcgacgatttcgagcccggttttctacgacaccgaaggggtacgtcaacat
gtggaatga
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