Brevundimonas pondensis: IFE19_08075
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Entry
IFE19_08075 CDS
T07639
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bpon
Brevundimonas pondensis
Pathway
bpon00540
Lipopolysaccharide biosynthesis
bpon01100
Metabolic pathways
bpon01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bpon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IFE19_08075 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bpon01005
]
IFE19_08075 (rfaD)
Enzymes [BR:
bpon01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
IFE19_08075 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bpon01005
]
Core region
IFE19_08075 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
QTC89512
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All DBs
Position
1609237..1610226
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AA seq
329 aa
AA seq
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MIVVTGGAGFIGSNIVARLCEAGAWDVVVCDRLETADLAKWKNIAKHPIADLWAPEELFE
QLERHADRIEAVIHMGAISSTTEPDADLILHTNFSLSRDIWDWCAVRNVRMIYASSAATY
GDGEAGFEDRDDPENLNALRPLNAYGFSKYLFDQYAVRQADRGEAPRQWAGLKFFNVYGP
NEGHKGGMKSVVAQIWPKVQAGETVSLFRSHNPNYPDGGQLRDFVFVDDVVGIILWLLER
EDISGVFNAGSGQARSFADLARATFAAAGKEPSIAYVDMPEAIRDRYQYFTEASMDRIRA
LGYGGQSTPLEEGVRRYVQDFLAQPDSYR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcgtcacgggcggcgcgggcttcatcggctcgaacatcgtcgcccggctttgt
gaagccggcgcctgggacgtggttgtctgcgaccggctggagacggccgatctcgccaag
tggaagaacatcgccaaacatccgatcgccgacctgtgggcgccggaggaactgttcgag
cagttggagcgtcacgccgaccgcatcgaggcggtgatccacatgggcgccatctcctcg
acgaccgagccggacgccgacctgatactgcacaccaacttcagcctgtcgcgcgacatc
tgggactggtgcgcggtgcgtaatgtgcggatgatctacgcctcctcggcggctacctac
ggcgacggcgaggccgggttcgaggaccgcgacgatcctgagaacctgaatgctctgcgt
ccgctaaacgcctatggcttctcaaaatatctgttcgaccagtatgccgtacgtcaggcc
gatcggggcgaggcgccgcgtcagtgggccgggctgaagttcttcaacgtctatggcccg
aacgagggtcacaagggcgggatgaagtctgtcgtcgcccagatctggcccaaggtgcag
gcgggcgagacggtcagcctgttccgctcgcacaacccgaactaccccgacggcggccag
ctgcgcgacttcgtcttcgtcgacgacgtggtcggcatcatcctgtggctgctggagcgc
gaggatatctcgggcgtgttcaacgccggatcgggtcaggcgcgttccttcgccgacctg
gcgcgcgccaccttcgcggcggcgggcaaggagccgtccatcgcctatgtggacatgccc
gaggcgatccgcgaccgctatcagtacttcaccgaggccagcatggaccgcatccgtgcc
ctcggttacggcggccagtcgacgccgctggaagaaggcgtgcgccgctacgtccaggac
ttcctggcccagccggattcctatcgatga
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