Bifidobacterium pseudocatenulatum: BBPC_0540
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Entry
BBPC_0540 CDS
T03932
Name
(GenBank) putative elongation factor
KO
K18220
ribosomal protection tetracycline resistance protein
Organism
bpsc
Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bpsc01504
]
BBPC_0540
Antimicrobial resistance genes [BR:
bpsc01504
]
Gene variants
Tetracycline resistance genes
Others
BBPC_0540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
EFG_III
MMR_HSR1
DUF5979
Motif
Other DBs
NCBI-ProteinID:
BAR03218
UniProt:
C0BPV4
LinkDB
All DBs
Position
670414..672402
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AA seq
662 aa
AA seq
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MKRIVAGILAHVDAGKTTLSEALLYATGQVRKLGRVDHGDAFLDTDAMERQRGITIFTEP
AVIATPDLTITLLDTPGHVDFSAETERTLAVLDYAILVISGADGIQGHTETLWRLLNRYQ
VPTFVFVNKMDSPGADKTQLLAQLKKRFSDGCVDFTEPIDGERMEEIAMQNETAMDAYLD
TETVPDETIRAMIARRELFPCYFGSALKMDGIEQFVAGFERFAQEPQYNGEFGARIYKVS
HDAQGNRLTWLKVTGGELKAKMMLSGTAHAGDADVVAEDGQWHEKADQVRVYSGAKSTTV
DTVPAGTICAVTGLTQTFPGEGLGMERDAGSPVLQPVLTYTLEPGECDIHKCLVALRELE
DEDPLLHVVWQSRLEEVHLQLMGAVQLEIIQQIMHDRFGLDVTFGPGSILYKETIAAPVE
GIGHFEPLRHYAETHVLLEPLPQGSGMAYATVCSEDVLDRNWQRLIMQHFQEREHLGVLT
GSPITDMRITLLTGRAHLKHTEGGDFRQATYRAIRQGLMEAKKKGDCRLLEPWYGFRLEV
PQDMVGHAMADIQRMSGTFDTPTGDGEYMVLNGTAPVSEMRDYAMDVNAYTHGRGHLSCV
FAGYQPCHNADEVIENMAYDPESDLENTPDSVFCAHGAGYPVKWYKVPEFMHLDYAWHGE
EA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaatcgtcgcgggcattctggcgcatgtggacgcgggcaagaccacgttgtcg
gaggcgctgctgtacgctaccggccaagtacgcaaactcggccgcgtcgaccacggcgac
gccttcctcgacacggacgccatggaacggcagcgcggcatcaccatcttcaccgagccg
gccgtcatcgccacgcccgacctcaccatcaccctgctcgacactcctggacacgtcgac
ttctccgccgaaacggaacgtacgctcgccgtgctcgactacgccatcctcgtcatctcc
ggcgcggacggcatccaaggccataccgaaacgctgtggcgactgctcaatcgctatcag
gtgcccacattcgtcttcgtcaacaaaatggactcgcccggcgccgacaaaacgcaactg
ctcgcccaactcaagaaacgcttctcggacggctgcgtcgacttcaccgagccgattgac
ggcgaacgcatggaggagatcgccatgcaaaacgaaacggccatggacgcgtatctcgac
accgaaaccgtgccggacgaaaccattcgcgccatgatcgcccgccgtgagctgttcccc
tgttatttcggatcagcgctgaaaatggacggtatagaacagttcgtcgcaggtttcgaa
cggttcgcgcaagagccgcaatacaatggcgaattcggcgcacgcatatataaggtgtct
catgacgcgcaaggcaaccgtctgacctggctcaaggtgaccggcggcgaactgaaggcc
aagatgatgctaagcggcaccgcgcacgccggcgacgcggatgtggttgccgaagacggc
caatggcatgagaaagccgaccaggtgcgcgtctattccggcgcgaaatccaccaccgtc
gacacggtccccgcaggcaccatctgcgccgtcacgggtctgacgcagacattccccggc
gaaggcctcggcatggagcgggacgccggcagtccggtcctccagccggtgctcacgtac
acgctggaaccgggggagtgcgacattcacaaatgtctcgtcgccctacgcgaactggag
gacgaggatccgctgctgcacgtcgtctggcagtctcgcctagaggaagtgcacctgcag
ttgatgggcgcggtgcagctggagatcatccagcagatcatgcacgaccgtttcggcctg
gacgtcacgttcggaccgggcagcatcctgtacaaggagacgatcgccgcgccggtcgaa
ggcatcggccatttcgagccgttgcgtcactacgccgaaacgcatgtgctgctcgaaccg
ctgccgcagggctcgggcatggcatacgccaccgtgtgcagcgaggacgtgctcgaccgc
aactggcagcgcctcatcatgcagcatttccaggaacgcgagcatctgggcgtgctcacc
ggctcgccgatcaccgatatgagaatcacgctgctgacgggccgtgcgcatctgaagcac
acggaaggcggcgatttccgccaagccacctaccgcgcgatacgccagggcctgatggaa
gcgaagaagaagggcgattgccgtctgcttgaaccttggtacggcttccgtctggaagtg
ccgcaggacatggtcggacatgcgatggccgacatccagcgcatgtcgggcacgttcgac
acgcctaccggcgacggcgaatatatggtgttgaacggcacggcgccggtatccgaaatg
cgtgactatgcgatggacgtgaacgcgtacacgcacggccgtggccatttaagctgcgtg
ttcgccggctaccagccgtgccacaatgccgacgaggtgatcgagaacatggcttacgat
ccggaatccgacctggagaacacgccggattcggtgttctgcgcgcatggcgccggctat
ccggtcaaatggtacaaggtccccgaattcatgcacctcgactacgcctggcacggcgaa
gaggcgtaa
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