KEGG   Paraburkholderia phytofirmans PsJN: Bphyt_3887
Entry
Bphyt_3887        CDS       T00765                                 
Name
(GenBank) delta-1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
bpy  Paraburkholderia phytofirmans PsJN
Pathway
bpy00250  Alanine, aspartate and glutamate metabolism
bpy00330  Arginine and proline metabolism
bpy01100  Metabolic pathways
bpy01110  Biosynthesis of secondary metabolites
Module
bpy_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:bpy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Bphyt_3887
   00330 Arginine and proline metabolism
    Bphyt_3887
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bpy03000]
    Bphyt_3887
Enzymes [BR:bpy01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     Bphyt_3887
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     Bphyt_3887
Transcription factors [BR:bpy03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    Bphyt_3887
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: ACD18274
UniProt: B2T7J3
LinkDB
Position
1:complement(4348896..4352825)
AA seq 1309 aa
MASTTLGVKVDDLLRSRLKDAATRLERTPHWLIKQAIFAYLEKIEHGQLPPELSGVTGSA
DLADGASVEQEEDGASHPFLEFAQNVQPQSVLRAAITAAYRRPEPECLPFLVGQARLPAN
LAGDVQTMAGKLVETLRTKSKGGGVEGLIHEFSLSSQEGVALMCLAEALLRIPDRATRDA
LIRDKISKGDWKSHMGQAPSMFVNAATWGLMITGKLVTTNSETSLSSALTRLIGKGGEPL
IRKGVDMAMRLMGEQFVTGENISEALANSRKYEARGFRYSYDMLGEAATTEADAQRYYAS
YEQAIHAIGKAAGGRGIYEGPGISIKLSALHARYSRSQQERTMSELLPRVRSLAILARRY
DIGLNIDAEEADRLEISLDLLEALCFDPELAGWNGIGFVVQAYQKRCPFVIDYIIDLARR
SRHRIMVRLVKGAYWDTEIKRAQVDGLEGYPVYTRKIYTDVSYLACAKKLLSAPDAVYPQ
FATHNAHTLSAIYHLAGNNYYPGQYEFQCLHGMGEPLYEEVTGRDKLNRPCRVYAPVGTH
ETLLAYLVRRLLENGANTSFVNRIADENVAIKDLIADPVDEASKIVPLGAPHAKIPLPRN
LYGAERLNSMGLDLSNEHRLASLSSALLASAHHPWRAAPMLEDNEIAVGVARDVRNPADH
RDLVGTVVEATPEHVSAALAHAVAAAPIWQATPVDARADCLARAADLLEAQMHTLMGLVV
REAGKSLANAVAEIREAIDFLRYYSTQIRDEFSNDTHRPLGPVVCISPWNFPLAIFMGQV
AAALAAGNTVLAKPAEQTPLIAAQAVRILREAGVPAGAVQLLPGNGETVGAALVADPRTR
AVMFTGSTEVARLINKTLSGRLDPDGKPIPLIAETGGQNAMIVDSSALAEQVVADVLQSS
FDSAGQRCSALRVLCLQDDVADRTLEMLTGAMRELAVGNPDRLSIDVGPVIDLDAKRGID
AHVATMREKGRKVEQLPMPDGCAQGTFVPPTLIELDSIDELKREVFGPVLHVVRYRRSQL
DKLLEQIRTTGYGLTLGIHTRIDETIAHVISRAHVGNIYVNRNVIGAVVGVQPFGGEGLS
GTGPKAGGALYLQRLLATRPAGLPKSLAQALVADAPNAAENSDNPSAALTAYRDWLIAEQ
QPVLAARCDGYLSHMPAGATAVLSGPTGERNTYTLGPRGTVLCIASTASGARVQFAAALA
TGNRALFEGAAGEQLVAQLPASLKSRASVKKSADATFDAVLFEGDSDELLALVKEVAKRP
GPIVSVQGVAARALESGDEDYALERLLTERSVSVNTAAAGGNANLMTIG
NT seq 3930 nt   +upstreamnt  +downstreamnt
atggctagcaccacccttggcgtcaaggtcgacgacctcctgcgttcccggctgaaagat
gccgctacccgtcttgaacgcactccgcactggctcatcaagcaggccatcttcgcgtac
ctcgaaaagatcgagcacggtcagttgccgcccgaactgtcgggcgtgacaggctcggcg
gatcttgccgatggcgcctcggtcgagcaggaagaagacggcgcgtcgcacccgttcctc
gagttcgcgcaaaacgtgcagccgcaatcggtgctgcgcgcggcgatcacggccgcttac
cgccgtcccgagccggaatgcttgccgttcctggtcggccaggcgcgtttgccggcgaac
ctcgcgggcgatgtgcagacaatggccggcaagctcgtcgaaacgctgcgcaccaagagc
aagggcggtggggtcgaaggtctgatccacgagttctcgctgtcgagccaggaaggcgtg
gcgctgatgtgcctcgccgaagcgctactgcgcattcctgaccgcgccacgcgcgacgcg
ctgatccgcgacaagatcagcaagggcgactggaaatcgcacatgggccaggcgccgtcg
atgttcgtcaacgccgcgacgtggggcttgatgatcaccggcaagctggtgacgaccaat
agcgaaacgagcctttcgtcggcgcttacgcgtttgatcggcaagggcggtgagccgctg
atccgtaagggcgtcgacatggcgatgcgcctgatgggcgagcagttcgtcaccggagag
aacatctccgaagcgctggccaatagccgcaaatacgaagcacgcggcttccgctactcg
tacgacatgctcggcgaagcggccaccaccgaagccgacgcgcagcgctactacgcctcg
tacgaacaggcgatccacgcgatcggcaaggccgccggcggccgtggcatctacgaaggc
ccgggcatttcgatcaagctttccgcgctgcatgcacgctactcgcgttcgcagcaggag
cgcacgatgagcgaattgctgccgcgcgtgcgctcgctggcgatcctcgcgcgccgctac
gacattggcctcaacatcgacgccgaagaagccgaccgtctggaaatctcgctcgatctg
ctcgaagcgctgtgcttcgatccggagctggccggctggaacggcatcggctttgtggtg
caggcgtatcagaagcgttgcccgttcgtgatcgattacatcatcgatctggcgcgccgg
agccgtcaccgcatcatggtgcgcctcgtgaagggcgcgtactgggataccgaaatcaag
cgcgcgcaagtggacggcctcgaaggctatccggtgtacacgcgcaagatctacacggac
gtgtcgtacctcgcttgtgccaagaaactgctgagcgcgcccgacgcggtctatccgcag
ttcgccacgcacaacgcccacacgctctcggcgatctatcacctcgcgggcaacaactac
tatcccggccagtacgagttccagtgcctgcacggcatgggcgagccgctgtacgaggaa
gtcaccggccgcgacaagctgaaccgtccgtgccgcgtgtacgcgccggtcggcacgcat
gaaacgctgctcgcgtacctcgtgcgccgtttgctggaaaacggcgcgaacacgtcgttc
gtgaatcgtattgccgatgaaaacgtcgcgatcaaggacctgatcgccgacccggtcgat
gaagcctccaagatcgtgccgctcggcgcgccgcacgcgaagattccgctgccgcgcaat
ctgtacggcgccgagcgtcttaattcgatgggcctcgatctgtcgaacgagcatcgtctg
gcgtcgctgtcgtcggcgttgctggcgagcgcgcatcatccgtggcgcgccgcgccgatg
ctggaagacaacgaaatcgccgtgggcgtcgcgcgcgatgtgcgcaacccggcggatcat
cgtgacctcgtcggcacggtcgtcgaagcgaccccggaacatgtgagcgccgcgctggcg
catgctgtcgccgcggcgccgatctggcaagccacgccggtcgatgcgcgcgccgattgc
ctcgcgcgtgccgccgatctgctcgaagcgcagatgcatacgctgatgggtttggtggtg
cgtgaagcgggcaagtcgctggccaatgcggtcgcggaaatccgcgaagcaatcgacttc
ctgcgctactactccacgcagattcgcgacgagttctccaacgacacgcatcgcccgctc
ggtccggtggtctgcatcagcccgtggaatttcccgctggcgattttcatgggccaggtg
gccgcggcgctcgctgccggcaacacggtgctcgcgaagccggccgaacaaacgccgctg
atcgccgcgcaagccgtgcgcattctgcgcgaagccggcgtcccggcgggcgcagtgcaa
ctgctgccgggcaatggcgaaacggtcggcgctgcattggtcgccgatccgcgcacgcgc
gccgtgatgttcaccggttccaccgaagtcgcgcgcctcatcaacaagacgctctcgggc
cgcctcgatccggacggcaagccgattccgctgatcgccgaaacgggcggccagaatgcg
atgatcgtcgactcgtcggcgctcgctgaacaggtggtcgcggacgtgctgcaatcgtct
ttcgactccgccggtcaacggtgttccgcgttgcgcgttctttgtctgcaggacgatgtc
gcggaccgcacgctggagatgctgacgggcgcgatgcgcgaactggctgtgggcaatcct
gatcgtctgtcgatcgacgtcggcccggtgatcgacctcgacgcgaaacgcggtatcgac
gcgcacgtcgcgacgatgcgcgagaaaggccgcaaggtcgagcaattgccgatgcccgac
ggttgcgcgcaaggcactttcgttccgccgacgctgatcgaactcgacagcatcgacgaa
ctgaagcgcgaagtgttcggcccggtgttgcacgtggtgcgttaccgccgcagccagctc
gacaagctgctcgaacagatccgcacgacgggctacggcctgacgctcggcatccatacg
cggatcgacgaaaccatcgctcacgtgatcagccgcgcgcatgtcggcaacatttatgtg
aaccgcaacgtgatcggcgcggtggtgggtgtgcagccgttcggcggcgaaggtttgtcg
ggcacggggccgaaagcgggcggcgcgctgtatctgcagcgtctgctggcgacgcgtccg
gccgggttgccgaagtcgctcgcgcaggcattggttgcggatgcaccgaacgcagccgaa
aacagcgacaatccgtccgctgcattgacggcttatcgcgattggctgatcgccgagcaa
cagccggtgctggccgcgcgctgcgacggctatctgtcgcatatgccggcgggcgccacg
gcggtactgtcgggaccgactggcgagcgcaacacgtacacgttgggcccacgcggcacg
gtgctgtgtattgcgtcgacggcgagcggcgcgcgcgtgcagtttgccgcggcgctggct
acgggaaatcgcgcgctgttcgaaggcgcggctggtgaacaattggtggcgcagttgccc
gcgtcgctgaaatcacgtgcgagcgtgaagaagagcgcggatgcgactttcgacgccgtg
ctgttcgaaggtgatagcgacgagctgctggcgctggtcaaggaggtcgcgaagcgtccg
ggcccgatcgtgtcggtgcagggcgtggcggcacgcgcgctggaaagcggcgacgaagat
tacgcgctcgagcgtctgttgacggaacgttcggtcagcgtgaatacggcagcagctggc
ggtaatgcgaatttgatgacgatcggttga

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