Paraburkholderia phytofirmans PsJN: Bphyt_4026
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Entry
Bphyt_4026 CDS
T00765
Name
(GenBank) Squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy00100
Steroid biosynthesis
bpy00909
Sesquiterpenoid and triterpenoid biosynthesis
bpy01100
Metabolic pathways
bpy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Bphyt_4026
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Bphyt_4026
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bpy01006
]
Bphyt_4026
Enzymes [BR:
bpy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Bphyt_4026
Prenyltransferases [BR:
bpy01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Bphyt_4026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ACD18412
UniProt:
B2TE91
LinkDB
All DBs
Position
2:42010..43176
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AA seq
388 aa
AA seq
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MGRDRSAAHGRGASPYTIRQRLIFCPFFARFLHNSDLIPSMPNPTRAFLLGPLLKGVSRS
FYLTLRVLPVGMRDPIGLAYLLARAADTIADTSLISPEQRLALLLSLRAQVNGATDDVAL
FQRMAAEVAGQQDQSDEKVLLESLGPALDVLSQLSESDRKAVREIVSTLTEGMEFDLRTF
PDERSGQIAALREYDELDRYTYLVAGCVGEFWTTMTYAHMPGTLKERPETMARRGVRFGK
ALQMTNVLRDCGKDLRIGRCYLPQTLLDRYGLSVQDLLVPANSVRARPLMLELLRTTLDH
FRDALDYTLAIPAFSVRLRLACLWPILIGLETLLLLVDNAAWLDPQKVSKVRRNRVYQII
ASSLLLVPSNGLVRNAIEQRIRQIEARL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggacaggtccgccgcgcacggcagaggcgcttcgccgtatacaattcggcag
cgcctgattttttgcccgttttttgcccgcttcctgcacaactccgacctgatcccatcc
atgccgaatccgacccgggccttccttctcggcccgctcctgaaaggcgtttcacgctcc
ttctatctcaccctgcgcgtgctgcccgtcgggatgcgcgatccgatcggactcgcttac
ctgctggcgcgcgcggccgacacgatcgccgacacctcgctgatctcgccggaacaacgc
cttgccttgctgctgtcactgcgcgctcaggtgaacggcgcaacagacgacgtggcgcta
ttccagcgcatggccgcggaagtggcggggcagcaggaccagtcggacgagaaagtgctg
ctcgaatcgctcggccccgcgctcgatgtgttgtcgcaactgagcgaatcggatcgtaag
gctgtccgcgagatcgtttcgacgctgaccgaaggcatggagttcgatcttcgcaccttc
cccgacgaacgttccggtcagatcgcggcgctacgcgaatacgacgaactcgaccgctac
acgtacctcgtggcgggctgcgtcggcgaattctggaccacgatgacctacgcgcacatg
cccggcacgctgaaggagcggcccgagacgatggcacggcgcggcgtgcgcttcggcaag
gcgctgcagatgaccaacgtgctgcgcgattgcggcaaggatctgcggatcggccgctgt
tatctgccgcagaccttgctcgaccgatatggtctaagcgtgcaggatttgttggtgccg
gctaattcggtgcgtgcccggccgctgatgctcgagcttttgcgcacgaccctcgatcat
ttccgtgacgccctcgattacacgttggcgattcctgcgttctccgtgcgtttgcggctc
gcctgtttgtggccgattctgattggtctggagacgctgctcctgctcgtggacaacgct
gcctggctcgatccgcagaaagtgtcgaaagtgcggcgtaatagggtgtatcagatcatc
gcgtcgtcgctgttgctggtgccttcgaatggactggtgcgcaacgccattgaacagcga
atcaggcaaatcgaagcccgcctttga
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