Bombus pyrosoma: 122566462
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Entry
122566462 CDS
T07776
Name
(RefSeq) probable DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122566462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpyo03400
]
122566462
DNA repair and recombination proteins [BR:
bpyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122566462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
Motif
Other DBs
NCBI-GeneID:
122566462
NCBI-ProteinID:
XP_043579644
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Position
LG4:complement(6716922..6723046)
Genome browser
AA seq
1127 aa
AA seq
DB search
MSKVNTLYNYFISPKTPKQSNNKKPDEKPSTPKRPREQWNKARISSRGKENIDVKDKKNV
SKDDDDKEEETEEKEPVQPKKRRLIIPDEESGEDSGDEFKPDPEDESEDSDSVSEEVSES
EPLTASEEESPEKKIKLAKAPRRKQEISTMKNTKDAKKESKPQQQNQTKGSDNVTESWPH
LKYDFLQPNKIRDIRRKLPSDPDYDPKTLYVPQDFLNQQTPAMRQWWELKSKHFDCVLFF
KVGKFYELYHMDAVISVNEINLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQTE
NPDMMAQRCSKMTRPTKFDKVVKREICQISSKGTRVYTPQDVEASTANSNYLLSLVEKCP
SGSNTSHYGVCFLDTTIGDFYLGQFEDDRCNSRILTLLAHYPPVHVVYERGNLSQKTLKI
LNNTLAACIKESLLRESQFWSSSTTLKNLHEGEYFKTSDSQFQWPAGLQPYLNQNDTLGL
TSADDKELAVHALGGCVYLLKEYLLEQQLLAQGCFKTYTPPDFSNEKSVASNFANNMVLD
AITINNLRIFGEGSLMKTLDRCCTAFGKRLLREWICRPSCRKNVIIERQQAIQELMDNTE
VMQNARSILSGLPDLERLLSKIHAQGNAAKMNNHPDGRAIMFEGQTYSKKKIADFIVTLS
AFEDVLKIVALFEDFKSTIVSQCTKIEPDGEFPSLRESLDYFKTAFDHEEAKKVGCIVPK
RGVDSEYDSVLIELDDVKADAQEYLEKQKKHFGVKVTFHGSDKKRYQIEIPDSQIKKIGA
GYELQSQRKGYKRYYTAETKELLSRQINAEEHRDKVLKDLNRRIFAKFSEKYDMWNMAVY
KLSVLDVLISLAEYALSGDMCIPEVNDGADKRVFIDIRDGWHPCIISDTFIPNNTLLGTE
NSASFMILTGPNMGGKSTLMRQVALLTIMTQIGSYVPASSCRLTLVDRIFTRLGANDDIL
AGQSTFLVELSETAAILQHATPYSLVLLDELGRGTSTYDGTAIAASVVNALTKLNCRTLF
STHYHSLVEDYKNTKEITLAHMACMVENEEQDEVSQETVTFLYKLSEGACPKSYGFNAAR
LAGVPSVITNRAHEISKKLEQETNYKHLFTSLCKANGTAIRDLIAAM
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtgaatacattgtacaattattttatttcgcctaaaactcctaaacaatcg
aataataagaaacctgatgaaaaacctagtacgccgaaaagaccaagagaacaatggaac
aaagcaaggatttccagcagagggaaagaaaatatagatgtcaaagataaaaaaaatgtc
tctaaagatgatgatgacaaagaagaggaaacagaagaaaaggaaccagtacagccaaaa
aagcgaagattgattatccctgatgaagagtctggagaagattctggtgatgaatttaag
cctgatccagaagatgaatcagaagattctgattcagtatctgaagaagttagtgaaagt
gagccactaacagcaagtgaagaggaatctccagagaagaaaataaaattggctaaagct
cctagaagaaaacaggaaataagtacaatgaaaaataccaaagatgctaaaaaagaatca
aaaccacagcaacaaaatcaaaccaaaggttcggacaatgttacagaatcttggccacac
ttaaagtatgatttccttcaaccaaataaaatacgagatattcgtagaaaactaccaagt
gatccagattatgatcctaaaactctttatgttcctcaggatttcttgaatcaacaaact
ccagctatgagacaatggtgggaattaaaaagcaaacatttcgattgcgttcttttcttt
aaagtaggaaagttttacgaattgtatcacatggatgctgtaattagtgttaatgaaatc
aatcttacatatatgagaggagaatttgcgcattcgggatttccagaaattggatatggt
cgtttctcagcaagtctcatagaaagaggctacaaagtggccagggtagaacaaacagaa
aatccagacatgatggcacaacgttgtagcaaaatgactaggccaacaaagttcgacaaa
gtagttaaacgagaaatttgtcaaataagcagtaaaggtacaagagtatacactccacag
gatgtagaagcatctacggcaaattccaattatttgttatcactagttgaaaaatgtcca
tctggttcaaacacatctcattatggagtgtgtttcttagatactacaataggagacttc
tatctcggtcaattcgaagacgatcggtgcaattctagaatactaactttgctcgctcat
tatccgccggttcatgtggtttatgaacgaggtaatttgtctcaaaagaccctaaaaatc
ttaaacaacactttagcagcgtgtattaaagaatcacttttacgcgaatctcaattttgg
tcatcttcgactacgttaaaaaatcttcatgaaggagaatacttcaaaacttcagactct
cagtttcaatggcctgcaggcttacaaccatatcttaatcaaaatgatactttaggttta
acttctgctgatgataaagagttagcggtgcatgccttaggtggatgtgtatacttactc
aaagaatatctgcttgaacagcaattattggcacaaggatgttttaaaacgtatactccg
ccagatttttcaaatgagaaatctgtggcttcaaactttgcgaataatatggttttagat
gctattacgattaataatttgagaatattcggcgaaggttctctcatgaaaacactggat
cgttgctgtactgcatttgggaagaggttattacgagaatggatttgcagaccatcctgt
cgcaaaaacgttataatcgaacgtcaacaagctatacaagaattaatggataatacagag
gtgatgcaaaatgctcgtagtatattatcaggactccctgatcttgaaagattattaagc
aagatccatgcacaaggaaatgcggcgaaaatgaataatcatccagacggcagggcgatt
atgttcgagggtcaaacgtattcaaagaaaaagattgcagattttattgttactctgagt
gcgttcgaggatgttctaaaaattgttgctttgttcgaagatttcaagagtactatagta
agtcaatgtactaaaatagagccggatggtgagtttccttcattaagagaatcattagat
tatttcaagaccgcattcgatcacgaagaagccaaaaaagtaggctgtattgttccgaag
agaggagtcgatagtgagtacgactctgttttaatagaattggatgatgtaaaggcagat
gcccaagagtaccttgaaaagcaaaaaaagcacttcggcgtgaaagtcacgtttcatgga
tcggataagaaacgttatcaaatcgagattccggattctcaaataaagaaaattggtgcc
gggtatgagcttcaatcacaaagaaaaggatacaaacgctattacactgccgagactaag
gaacttttgagtcgacaaataaacgccgaagaacacagggataaagtactaaaggattta
aacagaagaatatttgcaaaatttagcgagaagtatgatatgtggaatatggcggtttat
aagttgtccgtcttggatgttcttatctctttggcggaatacgctctcagcggagatatg
tgtataccagaagttaacgatggtgcagacaaaagggtatttatcgatattcgagacgga
tggcatccatgtattatctccgatacatttataccaaataacactttactaggaactgaa
aattccgcttcttttatgattcttactggaccgaatatgggtggtaaatcaacattgatg
cgtcaggtcgcccttcttactataatgacgcaaattggaagttacgtccctgcaagttcc
tgtcgtttgacattagtggatcgtattttcacaaggctcggcgcaaatgatgatattcta
gctggtcagagtacgttcttggtagagttgagcgaaactgctgcgatattgcagcacgct
acgccatattcactagtgttgcttgatgaattgggtcgtggtacgtcgacgtatgacggc
acggcaatagccgcttcagttgtgaatgcacttacaaaattgaattgccgtactctattt
tcgacacattatcattctttggtagaagattacaagaacacaaaggaaattacattggcc
catatggcatgtatggtagaaaatgaggaacaggatgaagtgtctcaggaaacagtaaca
tttttgtacaaacttagcgagggagcttgtccgaaatcatacggttttaatgctgctcga
ttagctggcgttccatctgtaattacaaacagagcgcatgagatctcaaagaaactcgaa
caagagacaaattataaacatctcttcaccagcctatgtaaggcgaacggaacagccata
agagatctgatcgctgcaatgtga
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