Bradyrhizobium sp. ORS 278: BRADO0403
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Entry
BRADO0403 CDS
T00516
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
bra
Bradyrhizobium sp. ORS 278
Pathway
bra00020
Citrate cycle (TCA cycle)
bra00270
Cysteine and methionine metabolism
bra00620
Pyruvate metabolism
bra00630
Glyoxylate and dicarboxylate metabolism
bra00680
Methane metabolism
bra00710
Carbon fixation in photosynthetic organisms
bra01100
Metabolic pathways
bra01110
Biosynthesis of secondary metabolites
bra01120
Microbial metabolism in diverse environments
bra01200
Carbon metabolism
Module
bra_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bra_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bra_M00012
Glyoxylate cycle
bra_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BRADO0403 (mdh)
00620 Pyruvate metabolism
BRADO0403 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
BRADO0403 (mdh)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
BRADO0403 (mdh)
00680 Methane metabolism
BRADO0403 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
BRADO0403 (mdh)
Enzymes [BR:
bra01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
BRADO0403 (mdh)
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Gene cluster
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Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
Motif
Other DBs
NCBI-ProteinID:
CAL74351
RhizoBase:
BRADO0403
UniProt:
A4YKC5
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All DBs
Position
409671..410639
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AA seq
322 aa
AA seq
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MARDKIALIGSGQIGGTLAHLVGLKELGDVVMFDIAEGVPQGKALDIAQSSPVDGFDAHY
TGANSYEALDNAKVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPDAFVICIT
NPLDAMVWALQKASGLPAKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM
VPLTKYSTVAGIPLPDLVKMGWTSQARIDEIVDRTRNGGAEIVNLLKTGSAYYAPAASAI
AMAESYLRDKKRVLPCAAYLNGEFGVKDMYVGVPVVIGSKGVERIVEIELAGKDREAFDK
SVAAVQGLVDACKKIAPDLLGR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgacaagattgctttgattggctccggtcagatcggcggaacgctggctcac
ctcgtcggcctcaaggagctcggcgacgtcgtgatgttcgatattgccgaaggcgttccg
cagggcaaggcgctcgacatcgcgcagtcctcgccggtcgacggcttcgacgcccactac
accggcgccaactcctacgaggcgctcgacaacgccaaggtgtgcatcgtcaccgccggc
gtgccgcgcaagccgggcatgagccgcgatgacctgctgtcgatcaacctcaaggtcatg
gagcaggtcggcgccggcatcaagaagtacgcccccgacgcgttcgtcatctgcatcacc
aacccgctcgacgcgatggtgtgggcgctgcagaaggcctcgggccttcccgcaaagaag
gtcgtcggcatggccggcgtgctcgacagcgcgcgcttccgctacttcctggccgatgag
ttcaacgtctcggtcgaggacgtcaccgccttcgtgctcggcggccatggcgacaccatg
gtgccgctgaccaagtactccaccgttgccggcatcccgctgccggacctcgtcaagatg
ggctggacctcgcaggcgcgcatcgacgagatcgtcgaccgcacccgcaacggcggtgcc
gagatcgtcaacctgctcaagaccggctcggcctactacgccccggccgcctcggcgatc
gcgatggccgaaagctatctgcgcgacaagaagcgcgtgctgccctgcgccgcctatctc
aacggcgagttcggcgtgaaggacatgtatgtcggcgtgcccgtcgtcatcggttcgaag
ggtgtcgagcgtatcgtcgagatcgagctggccggcaaggatcgcgaggccttcgacaag
tcggtcgccgccgtgcagggcctggtcgacgcctgcaagaagatcgcgcccgacctgctc
ggccgctga
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