Brevundimonas sp. AJA228-03: HZ989_09795
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Entry
HZ989_09795 CDS
T09566
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
brea
Brevundimonas sp. AJA228-03
Pathway
brea00540
Lipopolysaccharide biosynthesis
brea01100
Metabolic pathways
brea01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
brea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HZ989_09795 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
brea01005
]
HZ989_09795 (rfaD)
Enzymes [BR:
brea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HZ989_09795 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
brea01005
]
Core region
HZ989_09795 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
QTN21011
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Position
1971210..1972199
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AA seq
329 aa
AA seq
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MIVVTGGAGFIGSNIVSRLCAEDRWDVVVCDRLEGADLGKWRNIAKSAIADFWQPEEIFL
QLERHAERVSAVVHMGAISSTTETDADLILRTNFSLSRDLWDWCAINETRMIYASSAATY
GDGEAGFEDADDLASISKLQPLNAYGYSKKLFDQYAVRQAARDHAPRQWAGLKFFNVYGP
NEGHKGGMKSVIAQIWPRVAVGETVSLFRSHHADYADGGQLRDFVFVDDVVDIVDWLLGT
PEVSGIFNAGSGQARSFLDLAMATFAAAGREPSIAYIDMPEAIRDRYQYFTEAKMNRLRA
LGFGGQSTPLEEGVRRYVQSYLSQPDPYR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggtcaccggcggtgccggcttcatcggctccaacatcgtctcgcgcctgtgt
gcagaggaccggtgggacgtcgtcgtctgcgaccggctggagggtgccgatctcggcaag
tggcgcaacatcgcgaagtcagccatcgccgacttctggcagccggaagaaatcttcctg
cagctcgaacggcatgcagagcgggtcagcgcggtcgtccatatgggcgccatttcctcg
accaccgagaccgatgcggacctgatcctgcgcaccaacttcagtctttcgcgcgatctc
tgggactggtgcgccatcaacgagacgcggatgatctatgcgtcctcggcggcgacctac
ggcgacggagaagccggattcgaggatgcggacgatcttgcatcaatctcgaagcttcaa
ccgctaaatgcttacggctattcgaagaagctgttcgatcaatatgcagttcgacaggct
gcgcgcgaccatgccccgcgccagtgggccggtctgaagttcttcaacgtctatggcccg
aacgaaggccacaagggcgggatgaagtccgtcatcgcccagatctggcccagggtcgcc
gtcggggagaccgtcagcctgttccgctcgcatcacgccgactacgccgacggcggtcag
ctccgcgacttcgtgttcgtggacgacgtggtcgatatcgtcgactggctgctgggcacg
cctgaggtcagcggcatcttcaatgccggatcgggtcaggccaggtcgttcctggacctg
gccatggccacctttgctgccgccgggcgcgagccctcgatcgcctatatcgacatgccc
gaggccatccgcgaccggtatcagtatttcaccgaggcgaagatgaaccggcttcgtgcg
ctgggcttcggtgggcagtccaccccgctggaggagggcgtgcgccgctacgtgcagtcc
tatctgtctcaaccggacccctacaggtga
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