Balearica regulorum gibbericeps (East African grey crowned-crane): 104643714
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Entry
104643714 CDS
T09009
Symbol
VCAM1
Name
(RefSeq) LOW QUALITY PROTEIN: vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Pathway
breg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104643714 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
breg04090
]
104643714 (VCAM1)
04091 Lectins [BR:
breg04091
]
104643714 (VCAM1)
CD molecules [BR:
breg04090
]
Proteins
104643714 (VCAM1)
Lectins [BR:
breg04091
]
I-type lectins (Siglecs)
104643714 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C2-set
Ig_6
Ig_C17orf99
ICAM_N
V-set_CD47
ICAM1_3_5_D2
Receptor_2B4
Herpes_gE_N
Ig_4
Motif
Other DBs
NCBI-GeneID:
104643714
NCBI-ProteinID:
XP_010311426
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MRRNGKVNIENAAEFIYALPVVVQAFEMEIIPANRVVAQIGETLILTCNTTGCASPSFSW
RTQMDNPLGGTVSNHRTYSTLTMNPVSTVNSHDYLCTVFCGEKEKKEKSIKVELYSFPSD
PIIEISPSLVAGEPVTVTCKIPDVYPSDHLEVFLKKEEHVLLKENFYDDDSTDTETKTVT
YSFNPTAEDIGKEITCVAKLPITDMDFEPKERVTSRKLNANFGPQNTTIITAFPHNSPME
GDPLEFICVTDSNPPPKIVWRKHLADESIQHLIENNVLSIPRARFTDSGLYICEVINLVT
NKMEIATVDIVIQGAPNIAELSIEPSATVQEGENVSIQCSAEGNPPPKIILRRKSDSADM
GPYSEGRILLLPSVMFLNGGDYECVAENEFGKIKSEITLNVEYGPRNTMVSVIPATAVKE
GETVTMKCTSSGNPAPVISWKKKKVTGESEKILKDATLTIQNIKSQDLGLYECEAYNQFG
KEEKAVKLVVQAAPKNTLSVFPSSAMIQGENVAICCPCVDVTSVQIPSQNITVLVYPSEN
IKDXENVTITCSTHSNPPSQRVLKKSIRRKQLFCHTLYSTVTKNDTGRCLLEVFSEAENN
IKVIEIAVVGRLEKPDQMIPLIIAFSSVTAVAVPVVAILIYVSRKAKINGSYSLVKALRL
KV
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaatggaaaagtaaatattgagaatgctgctgagtttatatatgctctccct
gttgtagttcaagcttttgaaatggagattatacctgctaacagagttgttgcacaaatt
ggagaaacactcatactcacatgcaatactactggctgtgcatcaccaagtttttcctgg
agaacccagatggacaacccccttggaggaacagtgagcaaccataggacatactctacc
ttgactatgaatccagttagcactgtgaattctcatgattatctttgtacagtcttctgt
ggtgagaaagagaaaaaagagaagagtatcaaagttgaactttactctttccccagtgat
cctatcattgagatcagcccatccttagttgctggagaaccggtcactgtcacctgtaaa
attcctgatgtgtatccttctgatcacctggaagtattcctaaaaaaagaggaacatgtc
cttcttaaggaaaatttttatgatgatgacagcacagatacggagaccaaaactgtgaca
tattcatttaatcccacggctgaagatattgggaaagagattacctgtgtggccaagtta
ccgattactgatatggactttgaacccaaagaaagagtaacttctcggaaactgaatgca
aactttggtccacaaaatactactatcattactgcatttccacacaactcaccaatggaa
ggagaccctctagaattcatttgtgtgactgatagtaatccaccaccaaagatagtttgg
agaaaacatctggctgatgaaagcattcagcatctgatagaaaacaatgtcctttctatt
ccccgtgcccgtttcactgattcaggactgtacatttgtgaagtaattaatctggtaact
aataaaatggagatagcaactgtggacattgttatacaaggtgctccaaacattgcagaa
ctctccattgagccttctgcaacagttcaggaaggagaaaatgtttccatacaatgttct
gctgagggtaaccctcctcccaagattattttaaggagaaaatctgacagtgcagacatg
gggccttacagtgaggggagaattctacttcttccatctgtgatgttcctaaacggagga
gactatgaatgtgtagcagaaaatgaatttgggaaaattaaaagtgaaataacgcttaat
gtggaatatggaccgaggaatacaatggtctctgttatccctgctactgctgttaaagaa
ggagaaactgtgacgatgaaatgtactagttctggtaatccagctccagtgatctcttgg
aagaaaaagaaggtcactggggagtctgagaaaattttaaaagatgcaactctaactata
caaaacataaaaagtcaagatctgggtctttatgaatgtgaagcttataaccaatttggc
aaagaagaaaaagctgtgaaattagttgttcaagctgcaccaaaaaatacactttcagtt
ttcccttccagtgcaatgatacaaggagaaaatgttgccatctgttgcccatgtgtagat
gttacatctgttcagattccttcccaaaatattactgtgttagtatatccatcagaaaat
attaaagactgagaaaatgtcaccattacttgtagcacacacagtaacccaccatcacag
agggtcttgaaaaaatccatcaggagaaagcaattattctgccatactttatactctact
gtcaccaaaaatgatacaggaagatgtttgcttgaggttttcagtgaggctgaaaacaac
atcaaagtgattgagatagctgttgtaggaagattggaaaaaccagatcaaatgatacca
ctgattattgcattctcctctgtaacagcagtagcagtacctgtagttgcaattttgatc
tacgtgtcaagaaaagcaaagataaatggatcctacagtcttgtaaaagcactcaggctg
aaagtgtga
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