Brevundimonas sp. 'scallop': E4341_06825
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Entry
E4341_06825 CDS
T09204
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres00190
Oxidative phosphorylation
bres03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
E4341_06825
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4341_06825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bres03019
]
E4341_06825
Enzymes [BR:
bres01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
E4341_06825
Messenger RNA biogenesis [BR:
bres03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E4341_06825
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QIF81439
LinkDB
All DBs
Position
complement(1382665..1384881)
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AA seq
738 aa
AA seq
DB search
MTDAAIHDDTRGEEVPASRAPQLALSEELMASPRRFFNRETSWLAFNERVLEEAANPNHP
LLERLRFLSISANNLDEFFMTRVAGLKGQLRERLRVLSADGLTPAEQLERINIAAGELMA
EQQLRWRQLKKELTVAGIEIVDRQKITKTEKERLEPEFLNQLFAVLTPLAIDPAHPFPFL
PNLGFSLALKLKRKGETKTFYALVPVPTQVRRFWELPTDGRSTPGHKRFITLENVLLLFI
DHLFPGCEVQEKGVLRLIRDSDIEIEEEAEDLVLEFEEALKQRRLGSVVRVKIEASMPVD
LRDFIVGELEAAPQDVVLVDGMLGLAQLSDLIPGGHPDLKFKGYEPRYPERVRDNGGDVF
AAIREKDLLIHHPFESFDVVVQFLRQAARDPNVIAIKQTLYRTSKDSPIVAALIEAAENG
KNVTALVELKARFDEEANLRWARAMERAGVHVVFGFVEYKTHAKVSVVVRREGEGLRTYC
HFGTGNYHPVTAKVYTDLSLFSCDPVLGRDATRVFNYITGYATPDHLEALVVSPLNMKAT
LIELIGKEMSAAAMGKPAAIWVKLNALVDVEIIDALYRASQWGVRIDLVVRGICCLRPGV
PGLSENIRVKSIVGRFLEHSRIVCFANGKDLPHDKAKVFISSADWMTRNLDRRVELMTPI
RNATVHDQVLDQIMVANLKDDAQSWVLDAEGRYTRVTPADPERPFSAHKYFMTNPSLSGR
GRKAKSLPAVLRYERPGR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccgcgatccatgacgacacccgaggcgaagaggttcccgcctctcgcgcc
cctcaactggcgctgagcgaagagctgatggcctcgccccgccggttcttcaatcgggaa
acctcgtggctggcgttcaacgaacgggttctggaagaggcagccaaccccaaccacccg
cttctggagcggctgcggttcctgtccatctcggccaataacctggacgagttcttcatg
acccgcgtcgccggtctgaagggccagttgcgcgaacgcctgcgcgtcctgtccgccgac
ggcctgacccccgccgaacagctggagcggatcaacatcgccgccggcgagctgatggcc
gaacagcagctgcgctggcgtcagctgaagaaggagctgacggtcgccggcatcgagatc
gtcgaccgtcagaagatcaccaagaccgagaaggagcgtctggaacccgagttcctgaac
cagctcttcgccgtcctgacgccgctcgccatcgacccggcgcaccccttccccttcctg
cccaacctcggcttctccctggcgctgaaactaaagcgcaagggtgagaccaagaccttc
tacgccctggtgccggtgccgacccaggttcgccggttctgggaactgccgaccgacggc
cgctccacgccggggcacaagcggttcatcacgctggaaaacgtgctgctgctgttcatc
gaccacctgttcccaggctgcgaggttcaggaaaagggcgtgctgcgcctgatccgcgac
tcggacatcgagatcgaggaagaggccgaggacctggtcttggagttcgaggaggcgctg
aagcagcgtcgtctgggctcggtggtgcgggtcaagatcgaggcgtccatgcctgtcgat
ctgcgcgacttcatcgtcggcgagctggaggccgcgccccaagacgtggttctggtcgac
ggcatgctgggcctggcccaactgtcggacctgatccccggcggccacccggatctgaag
ttcaagggctatgagccgcgctatcccgaacgcgtccgcgacaatggcggcgacgtcttc
gcggccattcgcgaaaaggatctgctgatccaccacccgttcgagagcttcgacgtggtg
gttcagttcctgcgtcaggccgcgcgcgatcccaacgtcatcgccatcaaacaaacgctg
tatcgcacctccaaagacagccccatcgtcgccgccctgatcgaggcggccgaaaacggc
aagaacgtcaccgccctggtcgaactgaaggcccgcttcgacgaagaggccaacctgcgc
tgggcgcgggcgatggagcgggccggcgtccacgtcgtcttcggcttcgtcgaatacaag
acccacgccaaggttagcgtcgtggtccggcgcgagggcgaaggcctgcgcacctactgc
cacttcggcaccggcaactatcaccccgtgacggccaaggtttacaccgacctgtcgctg
ttctcctgcgaccccgtcctggggcgcgatgcgacgcgggtgttcaattacatcacgggc
tatgcgacgccggaccacctcgaggccctggtcgtctcgccgctgaacatgaaggccacg
ctgatcgaactgatcggcaaggagatgtcggccgccgccatgggcaagcccgccgccatc
tgggtcaagctgaacgctctggtcgatgtcgagatcatcgacgccctgtaccgggccagc
cagtggggcgtgcgtatcgatctagtcgtgcgcggcatctgctgcctgcgtcctggcgtg
ccggggctgtcggagaatatccgggtcaagtcgatcgtcggccgcttcctggaacacagc
cgcatcgtctgtttcgccaatggcaaggacctgccgcatgacaaggccaaggtctttatc
tcttcggccgactggatgacgcgaaacctggatcgccgggtcgagctgatgacgccgatc
cgcaacgccaccgtccacgatcaggtgctggaccagatcatggtcgccaatctgaaggac
gatgcacaaagctgggtgctggacgccgaagggcgctatacacgcgtcacccccgccgat
cctgagcggcccttctcggcccacaaatacttcatgacaaatcccagcctgtccgggcgc
ggccgcaaagccaagagcctgcccgccgtcctgcgctacgagcgtccgggccgctga
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