Mycetohabitans rhizoxinica: RBRH_00787
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Entry
RBRH_00787 CDS
T01355
Name
(GenBank) tRNA (5-aminomethyl-2-thiouridylate) methyltransferase (EC 2.1.1.-) / tRNA (5-carboxymethylaminomethyl-2-thiouridylate) oxidase TrmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
brh
Mycetohabitans rhizoxinica
Brite
KEGG Orthology (KO) [BR:
brh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brh03016
]
RBRH_00787
Enzymes [BR:
brh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
RBRH_00787
Transfer RNA biogenesis [BR:
brh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RBRH_00787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox_2
Pyr_redox
Lycopene_cycl
GIDA
FAD_binding_3
NAD_binding_9
3HCDH_N
HI0933_like
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
CBW73636
UniProt:
E5AKG4
LinkDB
All DBs
Position
110701..112689
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AA seq
662 aa
AA seq
DB search
MTGPLIAAQLALREDGIPYSPLFDDVYHSAMGGIGQALHVFVAGNRLPANWQHKAVFSIV
ETGFGLGLNFLVTWSQWRGDPSRCDRLHFVSVEKHPFSRDDLDTLLTRLLDSHAELAGLA
RKLVRAWPMLTPGIHRLAFDDGRVTLTLALGDAAQMLPKLAVRADAFYLDGFSPAKNDAL
WSPAIFKALARMAEVGATFATYTSAGKVKAALTGAGFVHRKARGYGTKRDMLVGEFAPAY
RVRRHEPPPRAAWTHRHAIVVGAGLAGCAVAERLAARGWAITLLEQRDAPASEASGNPAG
VFHPMIARAMTPAMRLSSAGFLYALRAWQALADAGHALHWHAGGLLQLAQDDVDAAALRD
AIVAAGLPAGFAVAVDRDAASAYAGVTLERGGIWFPRGGWIAPPSLCRAQLAAARTTLAA
NGQSLAWRTLFGVRVEQLVHDVEGWHALDAAGGRIATAPVVVIANAHDAIRLGHLAHAPV
RSARGQLTILPHAAPPSLRMPVIGDGYALALDNGRLMTGASYDMDDAGLDERRASHDENI
SRLRALIPGIAPSVDWARVQGRVGLRCVVSDRLPMVGPLADEADPMAAGASQSGARLPEL
QRRPGLYGAFAYGSRGLVWAAISGELLASQINGEPWPLERDLADALDPARYLLRTLRATA
QR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgactggcccactcattgccgcgcaacttgcgttgcgcgaggacggcatcccttattca
ccgctgttcgacgacgtctaccatagcgcgatggggggcatcggccaggcgctgcacgtg
ttcgtcgcgggaaaccggctgcccgccaattggcaacacaaggcggtgttttcgatcgtg
gagaccggcttcgggctcggcttaaacttcctcgtcacatggtcacagtggcgcggcgac
ccctcgcgatgcgatcggctgcatttcgtttccgtcgaaaaacatccgttcagccgcgac
gatcttgacacgctgctcacgcgcctgctcgattcgcatgctgaacttgcaggccttgca
cgcaagctggtccgcgcctggcccatgctcacgcccggcattcatcggctggcgttcgat
gacggacgcgtcacattgacactggcactgggcgatgcagcgcaaatgctacccaagttg
gccgtgcgcgccgatgcgttctatctcgacggcttctcgccggccaaaaacgacgcgcta
tggtcgcccgcgatcttcaaggcgctagccagaatggccgaagtcggcgccacgttcgcc
acttatacctcggccggcaaggtcaaggctgcactcaccggcgccggtttcgtgcaccgt
aaggcgcggggctatggcaccaagcgcgacatgctagtcggcgaattcgcaccggcctac
cgggtccgacgccatgaaccgccgccgcgcgctgcctggacgcaccgccatgcgattgtg
gtcggcgcggggctggctggctgcgcggtagccgagcggctggctgcgcgcggctgggcg
atcacgctgctggaacagcgcgatgcaccggcgagcgaagcctcaggtaacccggcgggc
gtgttccatccgatgatcgcgcgcgcgatgacacctgccatgcggctctccagcgcgggc
ttcctgtatgcgctgcgggcctggcaggcattggccgacgctggccatgcgctgcactgg
cacgccggtggactgctgcagctcgcgcaagacgacgtcgacgccgcggcattgcgcgac
gccatcgtcgcagccggactgccggccggattcgccgtcgcggtagaccgcgatgcggcc
agcgcctacgctggcgtcacgctcgagcgcggtggcatctggttcccacgtggcgggtgg
atcgcaccgccatcactgtgccgtgcccaattggccgcggcacgcaccacgctcgccgcg
aacggccaaagtctggcgtggcgcacgctgttcggcgtgcgcgttgaacagcttgttcat
gacgtggaaggctggcacgcgctcgatgcagcgggcgggcggatcgccacagcacccgtc
gtggtcatcgccaacgcgcacgacgcgatccgtctgggccatttggcccacgcgccggtg
cgctcggcccgcgggcaattgacgatattgccacatgccgcgccgccttcgcttcgcatg
cccgtaatcggcgatggctacgcactggcactggataacggccgcctgatgaccggtgca
agctacgacatggatgacgctggcttggacgaacggcgcgcgtcacatgacgagaatatc
agccgcctgcgcgcgctcataccgggaatcgcgccgtcagttgactgggctagggtacag
gggcgggtaggcttacgttgcgtggtcagtgaccggctgcccatggtcggtccgctggcg
gacgaagcggatccgatggcagccggcgcctcccagtccggcgcacggctgccggagctg
caacggcgcccaggcctgtacggcgcattcgcctatggttcacgaggactcgtgtgggcg
gcgataagcggcgaattgctcgccagccagatcaacggcgagccttggccactggagcgg
gacctggctgacgcattggatccggcgcgttacctgctgcgcacgctgcgcgccacagct
caacgatag
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