Bradyrhizobium sp. SK17: CWS35_24395
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Entry
CWS35_24395 CDS
T05325
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
brk
Bradyrhizobium sp. SK17
Brite
KEGG Orthology (KO) [BR:
brk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brk03009
]
CWS35_24395
Enzymes [BR:
brk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CWS35_24395
Ribosome biogenesis [BR:
brk03009
]
Prokaryotic type
ribosomal protein modification factors
CWS35_24395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AUC97033
UniProt:
A0A2K8YHV2
LinkDB
All DBs
Position
complement(5297734..5299059)
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AA seq
441 aa
AA seq
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MQEAAAPKVSFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQ
ESLAAIGEAMAENGKVIVTGCMGAEPEQIESAYPGVLSITGPQQYESVLDAVHRALPPAH
NPHIDLVPPQGVKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPANDVLREAEKLV
KAGVKELLVISQDTSAYGVDLKYAESPWQDRSVRAKFYDLAKELGELGAWVRLQYVYPYP
HVDEVIGLMTEGKVLPYLDIPFQHASPDVLRAMKRPAAQEKTLARIQKWREQCPELTLRS
TFIVGFPGETDADFAYLLDWLDEAGIDRLGCFKYEPVAGATSNSIPNAVPDEVKQERWNA
LMARQQKISARRLKRKVGTRQQVIIDEVGPTVAKGRSKADAPDIDGAVYLTSRRPLKVGE
IVTAKIERSDEYDLHGTVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaggccgccgcgccgaaagtgagcttcgtgtccttgggatgccccaaggcgctg
gtcgattccgagcgcatcatcacccggctgcgcgcggagggctatgagctcgcgcgcaag
cacgacggcgccgacatcgtcatcgtcaacacctgcggcttcctcgacagcgccaagcag
gaatcgctcgctgcgattggcgaagccatggccgaaaacggcaaggtcatcgtcaccggc
tgcatgggcgccgagccggagcaaatcgaaagcgcctatccgggcgtgctgtccatcacc
gggccgcagcaatatgagagcgtgctggacgccgtgcaccgcgcgctgccgccggcgcac
aatccgcacatcgacctggtgccgccgcagggcgtcaagctgacgccgcgccactacgcc
tatttgaagatttccgagggctgcaacaaccgttgcagcttctgtatcatcccgaagctg
cgcggcgacctggtgtcgcggccggccaacgacgtgctgcgcgaagccgagaagctggtg
aaggccggcgtcaaggaattgctcgtcatctcgcaggacacgtcggcctatggcgtcgac
ctgaaatatgccgagagcccctggcaggatcgcagcgtccgcgccaagttctacgatctg
gcaaaagagctcggcgagctcggcgcctgggtgcggctgcaatacgtctacccctacccg
catgtcgatgaggtcattgggctgatgaccgaaggcaaggtgctgccctatctcgacatc
ccgttccagcatgcgagcccagacgtgctgcgcgcgatgaagcgcccggccgcgcaggag
aagacgctggcgcggatccagaaatggcgcgagcaatgccccgagctgacgctgcgctcg
accttcatcgtcggcttccccggcgagaccgatgccgatttcgcctatctgctcgactgg
ctcgatgaagccgggatcgaccgtctcggctgcttcaaatatgagccggtggccggcgcg
acgtcgaactcgattcccaatgccgtgccggacgaggtcaagcaggagcgctggaatgcg
ctgatggcacggcagcagaagatttcggcccgccgcctcaagcgcaaggtcggcacccgc
cagcaggtgatcatcgacgaggtcggaccgaccgtggccaagggccggtcaaaggccgac
gcgcctgacatcgacggcgccgtctatctgaccagccgccgcccgctcaaggtcggcgag
atcgtcaccgccaagatcgagcgctccgacgaatacgatctgcacgggaccgtcgccgga
ttctga
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