Bradyrhizobium sp. ORS 285: BRAD285_4958
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Entry
BRAD285_4958 CDS
T04956
Symbol
ligB
Name
(GenBank) Protocatechuate 4,5-dioxygenase beta chain (4,5-PCD)
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
bro
Bradyrhizobium sp. ORS 285
Pathway
bro00362
Benzoate degradation
bro00627
Aminobenzoate degradation
bro01100
Metabolic pathways
bro01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bro00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BRAD285_4958 (ligB)
00627 Aminobenzoate degradation
BRAD285_4958 (ligB)
00624 Polycyclic aromatic hydrocarbon degradation
BRAD285_4958 (ligB)
Enzymes [BR:
bro01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
BRAD285_4958 (ligB)
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
SMX59792
UniProt:
A0A1Y6KJB9
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Position
complement(4921974..4922810)
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AA seq
278 aa
AA seq
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MAKIVGSITTSHVPAIGGAIAKGLQQDPYWKPFFDGFPHVREWLAKVKPDVVVLVYNDHG
LNFFLDKMPTFAIGACDRYSNADEGWGIPQTAPFQGDSELSWHLIEHLVKEDFDLTTCQE
MVVDHAFTLPMALCWPDQKWPVRVVPVVVNTVQAPLPSAARCYKLGQALARAIESWPKDE
RVVVMGTGGLSHQLDGERAGFINKDFDEKFMASMVDDPAWATKYSTTELVELSGTQGVEL
LNWMVARGTLPEKVRKEHANYHIPISNTATGLMVLEPA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcgtcggcagcattaccacctcgcacgttccggccatcggcggcgcgatc
gccaaggggctgcagcaggatccgtattggaagccgttcttcgacggcttcccgcatgtg
cgcgaatggctcgccaaggtgaagccggatgtcgtcgtgctcgtctacaacgaccacggc
ctcaacttcttcctcgacaagatgccgacctttgcgatcggcgcctgtgatcgctacagc
aatgccgacgagggctggggcattccgcagaccgcgccgttccagggcgacagcgagttg
tcgtggcatctgatcgagcatctggtgaaggaggatttcgaccttaccacctgccaggag
atggtggtcgatcacgccttcacgctgccgatggcgctgtgctggccggaccagaaatgg
ccggtgcgcgtcgtgcccgtggttgtcaacaccgtgcaggcgccgctgccctcggccgcg
cgctgctacaagctcggccaggccttggcgcgcgcgatcgagtcctggccgaaggacgag
cgggtcgtggtgatgggcaccggcggcctgtcgcaccagctcgacggcgagcgtgcgggc
ttcatcaacaaggatttcgacgagaagttcatggccagcatggtcgacgaccccgcctgg
gcgacgaagtactcgacgacggagctggtcgagctgtcgggcacgcagggcgtcgagctg
ctgaactggatggtcgcgcgcgggacgttgccggagaaggtccgcaaggagcatgcgaac
tatcacatcccgatctcgaacacggcgacggggttgatggtgctggagccggcgtag
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