Bacillus rossius redtenbacheri: 134530223
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Entry
134530223 CDS
T09888
Name
(RefSeq) protein CLP1 homolog isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134530223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134530223
Enzymes [BR:
bror01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
134530223
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
134530223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
CbiA
AAA_16
AAA_22
ATP_bind_1
MMR_HSR1
ATPase
nSTAND3
TniB
Motif
Other DBs
NCBI-GeneID:
134530223
NCBI-ProteinID:
XP_063220965
LinkDB
All DBs
Position
3:complement(11866193..11887320)
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AA seq
425 aa
AA seq
DB search
MADDHEKDANTQEFKLDPDCELRFEVESKNEKITLELKSGMAEIFGTELVKGKNYVFTTG
AKIAVFTWQGCVVELRGKTDVSYVAKETPMVMYLNVHAALEQLRRSAEAGSTRGPITMVA
GPTDVGKSTVCRLLLNYAVRMGRRPIFVDLDVGQGQISIPGTIGALLVERPANVEEGFSQ
QAPLVYHYGHKNAGANTALYNMLVSRLSEVVSERMQANRKANASGVIINTCGWVKAEGYK
QLTHIAQAFEVDLIIVLDQERLYNELVRDMPTFVKVVFLPKSGGVVERSQYVRADSRDNR
VREYFYGLRTPLYPHSFDVWFSDTKIYKVGAPALPDSCMPLGMKAEDNMTKLVAVTPGPN
LLHHLLAVSFASSVEEDVITTNVAGFICVTNVDMERQCMTVLSPQLRPLPKTLLLLSEVQ
FMDSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatcatgagaaggatgcaaatacacaagaatttaaattagatcccgactgc
gagttacgatttgaggtcgaaagtaaaaatgaaaaaattacgctggagctgaagagtgga
atggctgaaatatttggcacagaactagtcaaaggaaaaaattatgtttttactacggga
gccaaaattgctgtattcacgtggcaaggatgtgtggtagagctgagggggaagacggat
gttagctatgttgcaaaggaaacaccaatggtgatgtacctcaacgtgcacgcggcgttg
gaacagctgcgacgcagcgcggaggcgggcagcacccggggccccatcaccatggtggcc
ggccccaccgatgtgggcaagtccaccgtctgccggctgctgctcaactacgccgtcagg
atgggccggcgacccatattcgtcgacctggacgtcggtcagggacagatctccataccg
ggaaccatcggggcgctgctggtggagaggccggccaacgtggaggagggcttctcgcag
caggccccgcttgtgtaccactacggccacaagaacgccggtgccaacacagctctctac
aacatgctggtgtctcgcctctcggaagtcgtctctgagaggatgcaagctaacagaaaa
gccaatgcgtccggagtgataatcaatacgtgcggctgggtgaaggcagagggctacaag
cagttgacgcacatcgctcaggcgtttgaggtggacctgatcatagtgctggaccaggag
aggctgtacaacgagctggtcagggacatgcccaccttcgtcaaggtcgtcttcctgcca
aagagcggcggtgtggtggagaggagtcagtacgtgcgtgcggactctcgcgacaaccgg
gtgcgggagtacttctacggcctgcgcaccccgctctacccccactccttcgacgtgtgg
ttcagcgacaccaagatatacaaagtgggagccccggcgttgcccgactcgtgcatgccg
ctcggcatgaaggcagaggacaacatgacaaagctggtggcggtcaccccgggtcctaat
cttcttcatcacctactcgcggtgagcttcgcatcatctgttgaagaagatgtcatcaca
acgaatgtggctggctttatttgtgtgacgaacgtggacatggagaggcagtgcatgacg
gtgctgtctccccagctgaggccgctaccaaagactctgctgctgctgtccgaggtgcag
ttcatggacagtcactag
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