Brassica rapa (field mustard): 103831127
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Entry
103831127 CDS
T03449
Name
(RefSeq) cyclin-dependent kinase D-2
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03022
Basal transcription factors
brp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103831127
09124 Replication and repair
03420 Nucleotide excision repair
103831127
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
brp01001
]
103831127
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103831127
03019 Messenger RNA biogenesis [BR:
brp03019
]
103831127
03400 DNA repair and recombination proteins [BR:
brp03400
]
103831127
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
103831127
2.7.11.23 [RNA-polymerase]-subunit kinase
103831127
Protein kinases [BR:
brp01001
]
Serine/threonine kinases: CMGC group
CDK family
103831127
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103831127
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
103831127
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103831127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
103831127
NCBI-ProteinID:
XP_009105226
UniProt:
A0A3P6B510
LinkDB
All DBs
Position
A07:23362122..23364372
Genome browser
AA seq
347 aa
AA seq
DB search
MSKSGGNQPVDRYLRRQVLGEGTYGVVYKATDTKTGKTVAVKKIRLGNQKEGVNFTALRE
IKLLKELNHPHIVELIDAFPHDGSLHLVFEYMQTDLEAVIRDRNIFLSPGDIKSYMLMTL
KGLAYCHKKWVLHRDMKPNNLLIGENGLLKLADFGLARVFGSPNRRFTHQVFATWYRAPE
LLFGSRQYGAGVDVWAAGCIFAELLLRRPFLPGSSEIDQLGKIFQAFGTPTQSQWSDMIY
LPEYMEFSYTPAPPLRTIFPMASDDALDLLSKMFIYDPRQRITIQQALDHRYFSSSPSPT
EPGKLQIPASKGDALEPKASEQNNQHGNSPAVLSPPGKMRRVMGPEG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatccggcggaaaccaacccgtagatcgatacctaagacgtcaagtgctcgga
gaaggaacatacggtgtcgtttacaaagccaccgacaccaagacaggtaagactgtcgcg
gtgaagaagattaggttaggaaaccagaaagaaggagtcaatttcacagcccttagggag
atcaagctcctaaaagagctgaaccatccgcacatcgtcgagctcatcgacgcgtttcct
cacgatggaagcttgcatctcgtcttcgagtatatgcagacggatttggaggctgtgatt
cgtgaccgtaacatttttctttctcctggtgatatcaagtcttatatgttgatgactctt
aagggtttagcttattgtcacaagaaatgggttctgcacagggatatgaagcctaataat
ctactgattggagagaatggtctgttgaaattagctgattttggcttggcgagagtgttt
gggagtccgaatcggaggtttactcatcaggtgtttgcaacttggtacagagcccctgag
ttgctgtttgggagtagacagtacggagcaggagttgatgtctgggctgcaggctgtatc
ttcgctgagctattacttcgtagacccttcctacctggttcttctgagatcgatcaactg
ggaaagatctttcaagcttttggaactccaacacaatcccaatggtccgacatgatctac
ctcccggagtacatggagttctcctacacaccagctccaccactacgtaccattttccct
atggcgagcgatgacgctttggatcttctatccaaaatgttcatctacgacccacgccaa
cggatcaccatacagcaagctttggaccacaggtatttctcgtcttctccatcaccaact
gagccagggaagcttcagattccagcttcgaaaggagacgccctcgaaccaaaggcatct
gagcaaaacaaccaacacggaaacagcccggccgtgctatcacctcctggaaaaatgagg
agagtgatgggtcctgagggataa
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