Brassica rapa (field mustard): 103842448
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Entry
103842448 CDS
T03449
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00270
Cysteine and methionine metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
103842448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103842448
03032 DNA replication proteins [BR:
brp03032
]
103842448
03036 Chromosome and associated proteins [BR:
brp03036
]
103842448
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
brp02048
]
103842448
Enzymes [BR:
brp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
103842448
Transcription factors [BR:
brp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103842448
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
103842448
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103842448
Prokaryotic defense system [BR:
brp02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
103842448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
BAH
DNA_methylase
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-GeneID:
103842448
NCBI-ProteinID:
XP_009117317
UniProt:
Q05KC4
LinkDB
All DBs
Position
A09:39401779..39408018
Genome browser
AA seq
1528 aa
AA seq
DB search
MVRNGTKAGEQKKRPLPEIKSDSDGEDLSTRHTRPKRAAACTNFKEKSVRISEKSTTVET
KQHQTVEDEVVALHFTASPQGGGDEPRQTRRLTDFILHDEYGVPQPVAMVEIGDIFVTGV
ILPSGECDDKEKGKGVKCDGFGRVENWSISGYDDGYPVVWFSTELADYDCGKPATSYKKM
YDYFYQKAFASVEVYKRVAKSAGGDSGVSLDELLVAVSRSMSLESKCFSTDFLVIRNFLI
RQGEFIYNQLAGLDETAKKDEASFAEIPVLVALRDENSRLDNGAVIQMEGRPSNGVLRID
GVSEAAKCEALTSDQEMVDEDQRYARIMQDEEDRKTMQRPKRKNGAALASNKGYVKTTED
EIAGDYPLPAYYKNFKDEADELIVADDYEVNYEDLPRRMLHNWALYNSDSRFISLELLPM
KPCADIDVTIFGSGLMAEDGGFWFGLDDPDTSTSGQPKKDLEGMPVFLSQIKEWMIEWGC
STISISIRTDVAWYRLGKPSKQYAPWFEPVLKTARVTIGIFGLLEEQTRMSKLSFEDVTK
RVSEFQKNDKAFISSDRLAVNRFLVGHGQIILQMFSEFPKKDIQRCSFVSDLARKRAERH
NTRWTIKKKKILFKVNCNPRAGMAPVVSKRKAMQATTTRLINRIWGEFYSNYSPEEPVQA
VGAENEEEEVEEEGEIEEDDAEETVPEPVEEVEKSHTPLKKIRGVSGKTESSWSGESLGK
TSAGEPLYRQALVGEEIVAVGGAVVLEDDGNEVIYFVEYMFEKSNNCKMLHGRLLQRGCD
TVLGNAANERELFLTNECKTVSLKEIKGTVSFEIRSRPWGHQFRKENTTADKLDRARAEE
RKTKDLPTEYFCKSLYSPERGGFFSLPLNDMGCASGTCSSCRIREDEEKKTEIKLNSSKT
GFSCNGVDYSVDDYVYVKPEDIDGSKEANGRFKSGRNIGLRPFVVCQILEIIVLKESRKA
SFEVKVRRLYRPEDVSDEKAYASDIQELYYSEDTDVLQPEALEGRCEVRKKIDMPSRREY
PISDNIFFCEQIYDPSKGSLKQLPVNIKPKYTTVKDEALLRKRKGKGLVTETDSVTDKPE
EVSKETRLATLDIFAGCGGLSQGLEQAGVSATKWAIEYEEPAGKAFRKNHPETTVFVDNC
NVILRAIMEKCGDQDECISTKEANELAEKLDEDQKRTLPLPGQVDFINGGPPCQGFSGMN
RFNQSSWSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQ
VRFGILEAGAYGVSQSRKRAFIWAAAPDEVLPEWPEPMHVFGVPELKISLSKGVHYAAVR
STQYGAPFRPITVRDTIGDLPSVVNGESNTKREYKAQPISWFQKEIRGDNIALTDHICKE
MNELNLIRCKKIPKRPGADWRDLPEEKVTLSKGQVVDLIPWCLPNTAKRHNQWKGLFGRL
DWEGNFPTSITDPQPMGKVGMCFHPDQDRIITVRECARSQGFPDSYVFQGNIIHKHRQIG
NAVPPPLAFALGRKLKEAVQLKKVTKTN
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaaacggaaccaaggctggggagcaaaagaagagacctctcccagagatcaaa
tcagactctgacggcgaagacctctccacgaggcacactaggccgaagcgcgccgcagca
tgcaccaacttcaaggagaagtccgtccgcatctccgagaaatccacaaccgtcgaaacc
aagcagcaccagactgtggaggacgaagttgtagctctacacttcacagcatctcctcag
ggcggcggcgacgagcctcgtcagaccaggaggctgactgatttcatcttgcacgacgag
tacggagtcccgcagcctgtggcgatggttgagatcggtgacattttcgtcacgggcgtt
atcttgccttctggtgaatgcgatgataaggagaaagggaaaggcgtgaagtgtgatggc
tttggacgcgtggagaattggagtatctcggggtatgatgatggctacccggtggtttgg
ttctcgacggagctggcggattatgactgtggtaagcctgctactagttacaagaagatg
tatgactatttctatcagaaggcgtttgcttctgtggaggtttataagagagtggctaag
tctgcgggtggggactctggtgttagtcttgatgagttgcttgtggcggtttcgaggtct
atgagccttgaaagtaaatgcttttctactgatttcttggttattagaaatttccttata
cggcaaggagagtttatatataaccagcttgctggtttggatgagacggcaaagaaagat
gaagctagctttgcggagattcctgtgctcgttgctcttagagatgagaatagtagactt
gacaatggtgctgttattcagatggaaggaagaccttctaacggggttttgaggattgat
ggagtttctgaagctgcgaagtgcgaggccttgacatctgatcaagaaatggttgacgag
gatcaaagatatgctagaattatgcaagacgaagaggataggaaaactatgcagcggcct
aaaagaaaaaacggcgcagctttggcttctaataaaggatatgtaaaaaccactgaggat
gagattgctggtgattatcctctcccggcttattacaagaatttcaaagatgaagcagat
gagcttatagttgctgatgactatgaggttaactacgaggacctgcctcgcaggatgctg
cacaactgggcactgtacaactcggattcaaggttcatatccctggagcttctcccgatg
aagccctgtgcggatattgatgtgacgatatttgggtctggtttgatggcagaggacggt
gggttctggtttggtctagatgatcctgatacttctacctctggacagccaaagaaggat
cttgaggggatgcccgtattcctcagtcaaataaaggaatggatgattgagtgggggtgt
tcaacaatctctatttcaatacgaacagatgtggcatggtatcgacttgggaagccgtca
aagcaatacgccccttggtttgaacctgttttgaaaacagctagggttacgataggcatt
tttggtctgctagaggagcaaactagaatgtctaagctctcatttgaagatgtcacgaaa
agagtgtctgagttccagaagaacgataaagctttcatttcttctgatcgcttggctgtt
aacagatttctagtcggccatgggcaaattattttgcagatgttctcagaatttcctaaa
aaggatatccagaggtgttcatttgttagtgatcttgcaaggaaaagggctgaaaggcac
aacacaagatggaccatcaagaagaagaagattttgtttaaagtaaattgtaatccaagg
gcaggcatggcacctgtggtatccaagaggaaagctatgcaagcaacaacaactcgtctg
atcaacagaatttggggagagttttactccaattactctccagaggaacccgtgcaggca
gttggtgcagaaaacgaggaggaagaggttgaagaggagggtgaaattgaagaagatgac
gcagaggaaactgttccagaacctgttgaggaggttgaaaagtctcatacccctttgaag
aaaattcgaggcgtttctggtaaaacggaatcaagttggagtggcgagagtctaggaaaa
acttctgctggtgagcctctctatcgacaagccctcgttggagaagaaattgtggctgta
ggtggtgctgtcgtgttggaagatgatggaaacgaggtcatctattttgtggagtacatg
tttgaaaaatcaaacaactgcaaaatgcttcatggaagactcttacagagaggatgtgac
actgttctgggtaatgctgctaacgagagggaactattcctgaccaatgaatgcaagact
gtatcgcttaaggagataaaaggaacggtcagttttgagattcgttcaaggccatggggg
catcagtttagaaaagagaacaccaccgcggacaagcttgaccgggcgagagcagaggaa
cgaaaaacgaaagacttgcctacggaatacttctgcaagagtttatattcgcctgagaga
gggggtttctttagccttccattaaatgatatgggctgtgcatctggaacctgcagttca
tgtaggataagagaagatgaagagaagaagacagagatcaaactcaactcttcaaagacg
gggttttcgtgtaatggggttgactattccgttgatgattatgtctacgtaaagccagaa
gatatagatggatcgaaggaggctaatgggagatttaagtctggtcgtaacattggctta
cgaccattcgttgtttgtcaaatactggagatcatcgtcctaaaagaatctagaaaggct
tcctttgaggttaaagtgagaaggctttataggcctgaggatgtttctgacgaaaaggcc
tatgcgtcagatatccaagagttgtattacagcgaggacacagatgttctccaaccagaa
gctctagagggaagatgtgaagtaaggaagaaaattgatatgccctcacgccgtgagtat
ccaatatcagataatatcttcttctgtgaacagatctatgacccgtccaaaggttctctc
aagcagttgcccgtcaatatcaagccgaagtacactactgttaaggacgaggcactttta
agaaagagaaaggggaaggggttagtgactgaaactgattctgtgactgacaagcctgaa
gaggtatctaaagagacgcgtcttgctacactagatattttcgctggttgtggtggactg
tctcagggacttgaacaggcaggtgtctcggcaacaaagtgggcgatagagtatgaagag
ccagctgggaaggcttttagaaaaaaccatcccgaaacaacagtttttgttgacaactgc
aatgtaattcttagggctataatggagaaatgtggagatcaggatgaatgtatctctact
aaagaagctaatgaactcgctgagaaacttgatgaagaccagaaacgtacgctgccactg
cccggccaagtggatttcatcaatggaggccctccatgccagggattctccggtatgaat
cggttcaaccaaagctcttggagcaaagttcagtgtgaaatgatattggcattcttgtca
tttgctgattatttccggccaagatactttctcctggagaacgtgaggacctttgtgtca
ttcaataaagggcagacgttccaacttactctggcttctcttctcgaaatgggttaccag
gtgagatttgggatcttggaggcaggtgcatatggggtttcccaatctcgcaaaagagct
ttcatctgggcagctgcaccagatgaggttctccccgaatggcctgagccgatgcatgtc
tttggtgttcctgagttgaaaatctcgctgtctaaaggtgtacattacgctgctgttcgc
agtactcaatacggtgcacctttccgcccaatcacagtgagagacacaattggcgatctt
ccatcagtagttaacggagaatccaacacgaagagagagtataaagctcaaccaatctcg
tggtttcaaaaggagataagaggagacaatattgctctcactgatcacatctgcaaagag
atgaacgaactaaacctcattagatgtaagaaaatcccaaagaggccaggggctgattgg
cgtgacctcccagaagaaaaggtgacgttatcaaaagggcaagtggtagatttgatacca
tggtgtctgccaaacactgcgaagcgacacaaccagtggaaaggactgtttgggagatta
gattgggaaggcaactttccaacatcaatcactgatcctcagccgatgggtaaggttggg
atgtgcttccatcctgaccaagacaggattatcactgtccgtgaatgcgcccggtcacag
gggtttccggacagctatgtgtttcaagggaacataatacacaagcataggcagattggg
aatgcagtgcctccacctttggcctttgctcttggtcggaagctcaaagaagcggttcaa
ctcaagaaggtcaccaaaacaaactag
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integrated database retrieval system
